Cyclopterus lumpus (lumpfish): 117736307
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Entry
117736307 CDS
T09199
Symbol
rapgef1a
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04510
Focal adhesion
clum04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117736307 (rapgef1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117736307 (rapgef1a)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
117736307
NCBI-ProteinID:
XP_034397435
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Position
9:complement(77546..111608)
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AA seq
912 aa
AA seq
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MSSRAESKTASQFVSLTMRLKDKLHPPRIRSSERIKQTLSQRPKPCDLNLQHEPVCVLAD
QQRAIISSLQYFKALVDRLGVDRLVLDPSVVGGLLGGASSGVLEAVQTLVQLEPHLHNSK
TVSSCLTRLYLSVAQLIHWADQVMLQGVAHGNKDSAASVTVVIRAVLDGVKELVRLAAER
QGASASLSLVQSPVTLGQTCGFDNHQTSERTSTSWSLGAPAEKEDEQTALAPPKPPMPLT
DPLPQVSLLQVSTQGLSPPVLPPKRRQSSGPAPCSVAIVAPRRREPEVDRQEDECLKRCS
SSSADYAAENTHCEDDPDYDFLHTDLSSSQTLPPLPHPASLPPALPEKRRCSTAETTMGK
ASFSFGFDAAPPEKSHCEDVVGPDESPLSPLSPSQTPPPLPEKKRHIHQYLQFCSSYSAQ
SAAMFYQRPLTFSQHHSSRQQDLETTYRLTHLDRQTLDSTPSPKLCPAPVLPPKKRQQDP
VGPYEEDWTRDRSQSVQYEDQQEEVLLTDWQEVLQRITMKPPDEDGPDVKAASPEILLVH
ATATDSGAEQVVYREAFLSTYRSFISPKDVIIKLQQRYKHLSELGEPERITAANNTFHLL
VRVVDELCAIELDSDLLLLLMELVFSLLIGGELGLARLLRSNILSKMEQKWLLIGSPQSL
RPLAARGVTARPGTLLDFRSQDLAEQLTLLDSELFCKIELPEVLLWSKEQNEEKSPNLTE
FTQHFNNMSFWVRSVIILQDKSQDREKLLLKFLKIMKHLRRLNNFNSYLSILSALDSAPV
RRLDWQRNTAEALEEYSSLIDSSSSFRAYRAALADVEPPCIPYLGLILQDLTFVHLGNPD
TLMGSKVNFSKHWQQFNILDTLRRYQQVPYTLQPNDDIISFFNDFSDHLAEEALWELSLR
LRPRNTPRANQR
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccgggcagagagtaagacagcctcccagtttgtgtctctcaccatgaggctg
aaggataagctccacccaccgaggatcagaagttctgagcgaatcaaacaaaccctgtca
cagagacccaaaccatgtgatctgaacttgcaacacgagccggtgtgtgtgttggcagac
cagcagcgggccatcatcagctctctgcagtacttcaaagctctggtggacaggctggga
gtggacagactggttctggacccgtcagtggtgggcggtctgctggggggggcgtccagc
ggggtcctggaggcggtccagactctggtacagctggagccgcatctgcacaacagtaag
accgtctcttcctgtctcacccgtctctacctgtctgtggctcagctgattcactgggct
gatcaggttatgctacaaggcgtcgcccacggcaacaaggactccgcagcaagcgttacc
gtggtaatccgggctgtgctggacggggtcaaggaactggtccgattggctgcagagaga
caaggtgcctccgcctccttgtctcttgtccaatcaccggtcaccttgggacagacatgt
gggtttgacaaccatcagacatcagagaggacgtctacgtcctggagtttaggagctcct
gcagagaaggaggatgagcagacagctttggctcctcctaaacccccaatgcctctcaca
gatcccctcccccaggtgtccctccttcaggtgtccacacagggactcagtcctccagtc
ctgccgccgaaaaggcgtcaatcttcaggtcccgccccctgcagtgttgctatagtagca
ccaaggagacgagagcctgaagtggacagacaggaggacgagtgtttgaagcgctgctct
tcttcatctgcagactatgctgctgagaacacacactgtgaggacgacccagactacgac
ttcctccacactgacctgtcctcctctcagacgctccctcctcttcctcacccggcctcc
ctcccccccgccctgccagagaagagacgctgcagcactgcagaaactaccatgggtaag
gcctcgttttcgtttgggtttgacgccgccccccctgagaagagccactgtgaagatgtc
gttggacctgatgagtcacctttgtcccctctgtcccccagccagacgccaccccccctc
cctgaaaagaaacgacacatccatcagtaccttcagttctgttcgtcctacagcgctcaa
tcagcagccatgttctaccagcgacctttgaccttcagtcagcatcacagtagcaggcag
caagacctggagaccacttaccgtctcacacacctggacagacagacattagactccacc
ccctcacctaaactatgtcctgctccagttctaccaccaaagaagagacaacaggatcca
gttggaccgtatgaagaggactggaccagagacaggtctcagagtgtccagtatgaggac
cagcaggaggaggttctcttgacagactggcaggaggtcctccagaggatcaccatgaag
cctccggatgaggacgggccggacgtcaaagcagcctctccggagatcctattggtccat
gccaccgccactgacagcggagcagaacaggtggtgtaccgggaagccttcctctccacc
tacaggagcttcatcagccccaaagacgtcatcatcaaactccagcaaagatacaaacac
ctgagtgaactaggggagcctgaacgcatcactgctgccaacaacaccttccacctgctg
gtgagagtggtggatgagttgtgcgccatagagctggactctgatttgctgttgctgctg
atggagctggtgttcagcctcctgattggtggagagctgggtctggcccgcctcctgcgg
tccaacatcctgtccaagatggagcagaaatggctgctcattggctctcctcagtcgctc
cgtcccctcgcagccaggggtgtgactgccagaccaggaacccttctggacttcaggagt
caggatttagctgaacagctgactctgctggactctgaactcttctgcaagatcgagctt
ccagaggtgttgctgtggtctaaagagcagaatgaggagaaaagtccaaacctaaccgag
ttcacccagcacttcaacaacatgtccttctgggttcgttctgtaatcattcttcaggat
aaatctcaggacagagagaaactgctgctgaagttcctgaagatcatgaagcacctgcgg
aggctgaacaacttcaactcgtacctgtccatcctgtcagcactggactccgcccccgtg
cgacgcctggactggcagagaaacacagctgaggctctggaggagtacagctctttgatt
gacagctcatcatctttcagagcctatagagcagccctggctgatgtggaacctccatgt
ataccctacctgggcttgatccttcaggacttgacctttgtccacctggggaatcctgac
acattgatgggatcaaaggtcaacttctcgaaacactggcagcagttcaacatcctggac
actctgaggagataccaacaagttccttacactctgcagcctaatgatgacatcatatcg
ttctttaatgacttcagcgaccacctggcagaggaagcattgtgggaactctcactcagg
ctccgcccacgaaatactccaagagccaatcagagatga
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