Cyclopterus lumpus (lumpfish): 117736318
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Entry
117736318 CDS
T09199
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117736318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117736318
03036 Chromosome and associated proteins [BR:
clum03036
]
117736318
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117736318
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117736318
PBAF complex
117736318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
GCN5L1
HMG_WDHD1
Pcf11_helical
Motif
Other DBs
NCBI-GeneID:
117736318
NCBI-ProteinID:
XP_034397465
Ensembl:
ENSCLMG00005005381
LinkDB
All DBs
Position
1:14724675..14732568
Genome browser
AA seq
425 aa
AA seq
DB search
MSKRPSHAPPPPPTPTTQMPNTAGFVGYNPYIHLAYNNYRLGGSQSSNSRVTNSSGVNIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPELKLWEIGKIIGGMWRDLTDEEKQDYLNDYE
AEKIEYNESMKAYHNSPAYLAYVTAKGRAEAALEEESRQRQSRLDKGEPYISIQPADDPD
DYDDGFSIKHSAAARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEDRHQDKKRKFIEATESFTNDLKRLCCLKVEVDTEKISAEISAAEEAGRKRM
ADKDVGDRGTKEAPTCVLAEEEKHICATHGNKSQQNSQSESSNKEGEEAESNNTDTPEKP
KASEELETHPGSEEGASEEKESVPEGAMEEGTSDSNTGSETTSAQTEDAPTSEPSEGSSR
ARAAH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagagaccatcccatgcccctccccctccccctacccctacaacacaaatgccc
aacacagccggttttgtgggctacaacccatacatccatctggcctacaacaactacaga
ttgggagggagccaaagcagcaacagtcgggtaacgaattcctctggagtaaatatccca
aagccgcccaagccacctgataagccattgatgccatatatgagatatagtcgtaaggtt
tgggatcaagtaaaagcctccaatcctgagctgaagctatgggaaattgggaagataatc
ggtggcatgtggagggacctcactgatgaggagaaacaggattatttgaatgactacgaa
gcagagaagattgagtataatgagagcatgaaggcctatcacaactcaccagcatacctg
gcatacgttaccgctaaaggccgagccgaggcagccctggaagaggagagccgccagagg
cagtccagactggacaagggcgagccttacataagtattcagccagcggacgatccagat
gattacgacgacgggttttctataaagcactcggctgcagctcgtttccaacgcaaccac
cgtctaatcagcgagatcctcagtgagagcgtcgtcccagatgtgcgctcagttgttacc
actgctcgcatgcaggtcctcaaacgccaggtccagtctttgatggtacaccagagaaaa
ttggaagcagagttgcttcagattgaagaccgccaccaggacaagaaaagaaaattcatt
gaagccacagagtcgttcacaaatgacctcaaaaggctgtgctgtctgaaggtggaagtg
gacacggagaagatttctgcagagatttctgcagcagaagaggccggtcgcaaacggatg
gcagataaggatgtaggagacagaggcacaaaagaagccccaacctgtgtgttggcagaa
gaagaaaaacacatttgtgccacacatggcaacaagtcccagcaaaactctcaaagtgaa
agtagcaacaaagaaggtgaggaagcagaatccaacaacacagatacaccagagaagcca
aaagcttcagaggagcttgagactcatccaggcagtgaggagggggcatcagaggaaaag
gagagcgtccctgagggagccatggaggagggaaccagcgacagtaacacaggctcagag
accacctctgcacagacagaagatgccccgactagtgagccatcagaggggtccagcagg
gcaagagcagcccattga
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