Cyclopterus lumpus (lumpfish): 117736326
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Entry
117736326 CDS
T09199
Symbol
msi1b
Name
(RefSeq) RNA-binding protein Musashi homolog 1b
KO
K14411
RNA-binding protein Musashi
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117736326 (msi1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117736326 (msi1b)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117736326 (msi1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117736326
NCBI-ProteinID:
XP_034397471
Ensembl:
ENSCLMG00005010463
LinkDB
All DBs
Position
9:10211691..10237446
Genome browser
AA seq
349 aa
AA seq
DB search
METEGSQTSLSTTDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRS
RGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTATYTSRSYAGITPGYT
YQFPEFHLERTPLLTSPHPPELTAIPLTAYGPMAAAAAAAAVVRGSNQSRSAGFLGTSSP
GPMADLYGTAAQESAVSSYLSAASPSPNTGFSHSLGGPLIATAFTNGYH
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaagggagccagaccagcctgtccaccacggactcccctcacgacccctgc
aaaatgttcataggtggactcagctggcaaacaacacaagagggtttgaaggagtacttc
tgcaagtacggcgaggtgaaggagtgtatggtgatgcgagatccggttactaagcgctcg
agagggtttggatttgtcacctttgttgatcaggcaggcgtggataaagttttggcccaa
accaggcacgagttggactcaaaaacaatcgatcctaaggttgcgttccctcgcagagct
cagcccaagttagtgactcgaaccaagaagatctttgtgggaggcctgtctgtgaacaca
accatcgaggacgtgaaacagtactttgaccagtttgggaaggtcgacgatgccatgctc
atgttcgacaagaccaccaacagacacagagggtttggctttgtgacatttgagaacgag
gatgtggtggaaaaagtctgcgaaatccacttccatgagatcaacaacaaaatggtggag
tgtaagaaagctcagcccaaagaggtgatgtcccccacaggctcagccagggggcgctct
cgtgtcatgccctatggaatggacgccttcatgctgggcattggtatgctaggttatcca
ggcttccagacagccacctacaccagtcggagctatgctggcatcactcctggatatacc
taccagttccctgagttccacttagagaggactccccttctgacttcaccccacccccct
gagctcacagccattcctctgacagcatatggacccatggcggcggcagcagcagcagcg
gcagtagttagaggctccaaccagtctcgctcagctggatttttaggtacgagcagcccg
gggccgatggcggacctttatgggacagccgctcaggagtcggctgtcagcagttacctc
agtgctgcaagcccctccccaaacactggattcagccacagtttggggggccctttgatc
gccacggccttcaccaacggctatcactga
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