Cyclopterus lumpus (lumpfish): 117736341
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Entry
117736341 CDS
T09199
Symbol
plat
Name
(RefSeq) tissue-type plasminogen activator isoform X1
KO
K01343
tissue plasminogen activator [EC:
3.4.21.68
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117736341 (plat)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117736341 (plat)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
clum00536
]
117736341 (plat)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.68 t-plasminogen activator
117736341 (plat)
Peptidases and inhibitors [BR:
clum01002
]
Serine peptidases
Family S1: chymotrypsin family
117736341 (plat)
Glycosaminoglycan binding proteins [BR:
clum00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
117736341 (plat)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
Kringle
DUF1986
EGF
hEGF
Trypsin_2
JAG1-like_EGF2
EGF_Teneurin
Death_TNFRSF11B
cEGF
Motif
Other DBs
NCBI-GeneID:
117736341
NCBI-ProteinID:
XP_034397501
Ensembl:
ENSCLMG00005012039
LinkDB
All DBs
Position
9:complement(22140147..22152655)
Genome browser
AA seq
631 aa
AA seq
DB search
MPVSVEEVSHGQLSVCILSNLKSTWETMTRTLLLLLSALCCCLADNVELRRTKRGTRFYR
GEPDRQPARRTLLIIHVTKSSPSFDTFLHCVDGDTSAVRSYGDTWLRWRGQRVEYCRCAL
RGRERCHIVPVINCYVSQCYNGGTCKEAVYTSDYICQCPPGFSGAQCEINSNERCFVGQG
EGYRGTWSSSRSGAECINWNSTSLRGRKFTLRKADASSLGLGNHNFCRNPDNDSSPWCYI
YKNSQIVWEMCSTPKCPEDKNQECVKGSGQSYRGTTSVTKSGFRCLPWDSPAVKHKHNTA
WRSEALEQGLGSHSFCRNPDGDAGPWCHTYKRMQLTWELCDIPKCLRRPSVTLGPRGPTT
NNNHGATCGQRLDNTLNRPAFRMFGGRESDITEQPWQAAINVYQRRHRKHFHRCGGVLID
SCWVLSAAHCFDYNDKAEKLEVILGRTFRKQNSSSEQIFKVEKYWNHEKFDNETFDNDIA
LLKLKTDIGICAIHSPEVVPACLPERGLVLPDWTECEISGYGKDSEFAAEFSERVKRGYV
RLWPKERCVPDVLSQRPITSNMLCAGDTRGLDDACKGDSGGPLVCRNNDKMTLMGVISWG
DGCGQKDKPGVYTRVTHYIDWINSKIKANPV
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgtctgtagaagaagtctctcacggtcaactttcagtttgtatattgagcaat
ctgaagagcacttgggaaaccatgaccagaacactgttattgctcctgtctgctctctgc
tgctgcctagcggacaatgtggagctgcgccgcactaagagagggactcgtttttaccga
ggtgagcccgacaggcagccagccagacggacgcttttgattattcatgtcacgaagtct
tcaccctcctttgacaccttcctacattgtgtggatggcgacacgtcagcggtgcgtagt
tatggggacacttggctgcgatggaggggacagcgcgtggagtattgccgttgtgcgttg
agaggacgagagcgttgtcatattgtgcccgtcatcaactgctacgtgtctcagtgctac
aacggaggaacctgcaaggaggccgtgtacacttcggactacatttgccagtgtccccca
ggcttcagtggggctcagtgtgagatcaactccaatgagagatgctttgtgggtcagggt
gaagggtaccgcggcacatggagcagcagccgttcgggagcggagtgcatcaactggaac
tccacgtctctgaggggaaggaagttcaccctgaggaaagcggacgccagcagccttgga
ctgggcaatcacaacttctgcaggaaccctgacaacgacagcagtccttggtgttacatc
tataaaaacagtcagatcgtctgggagatgtgttccacgcccaaatgtccagaagataag
aaccaagaatgtgtgaagggctccggtcagtcataccgaggcaccacatctgtcacgaag
agcggctttcgctgcctcccgtgggactcccctgcggtcaagcacaagcacaacactgcg
tggagatctgaagcattggagcagggcctgggcagccacagcttctgcaggaacccggac
ggtgacgcaggtccgtggtgtcacacctacaagagaatgcagctgacctgggagctgtgc
gacatacctaaatgcttgagacgtccatccgtcactctcggcccacgtggccccaccacg
aacaacaatcacggagcaacatgtggccagcgcttagacaacaccctgaatcgcccggcg
ttccgcatgtttgggggcagagagagcgacatcacggagcagccgtggcaggcggccatc
aacgtttaccagcgccgtcacagaaaacacttccaccgatgcggaggagtcctcattgac
tcctgttgggtcctgtctgctgcacactgcttcgattacaacgataaagccgaaaaattg
gaagtgattttggggagaacgttccggaagcagaattccagcagcgagcagattttcaag
gtggagaagtactggaatcacgagaaattcgacaacgaaacatttgacaatgacatcgca
ctcttgaagctgaagacagacattggcatctgtgccatacactctccagaggttgttcct
gcgtgtctgcctgaacgtgggctggtgctgcccgactggaccgagtgcgagatctcgggc
tacggaaaagactcagaatttgctgcagagttctccgagcgcgttaagagaggttacgtc
cgcctgtggcccaaagagcgctgcgtcccagacgtgctgtcccaacgcccaatcacctcc
aacatgctgtgcgcaggtgatacccgaggcctggacgacgcctgcaagggagactctggt
ggcccgcttgtctgtcggaacaatgacaagatgactctgatgggtgtgatcagctggggc
gacgggtgcgggcagaaggataagcctggggtctacacccgcgtcacccattacatcgac
tggatcaacagcaaaatcaaggcaaaccccgtctaa
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