Cyclopterus lumpus (lumpfish): 117736362 Help Entry 117736362         CDS       T09199                                  Name (RefSeq) protein HIRA isoform X1   KO K11293   protein HIRA/HIR1 Organism clum  Cyclopterus lumpus (lumpfish) Brite KEGG Orthology (KO) [BR:clum00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:clum03036]     117736362 Chromosome and associated proteins [BR:clum03036]  Eukaryotic type   Nucleosome assembly factors    Histone chaperones     Other Histone chaperones and regulators      117736362 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Hira Beta-prop_CAF1B_HIR1 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR35_TULP_N EIF3I WDR55 Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st HIRA_B WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd Mcl1_mid Beta-prop_EIPR1 WD40_like Motif Other DBs NCBI-GeneID:  117736362 NCBI-ProteinID:  XP_034397548 Ensembl:  ENSCLMG00005006939 LinkDB All DBs Position 9:complement(1910893..1922704) Genome browser AA seq 1017 aa AA seqDB search MKLLKPSWVSHNGKPIFSVDIHPDGTKFATGGQGEDSGKVMIWNMAPVLRDEDEKNENIP KMLCQMDNHLACVNCVRWSNNGLYLASGGDDKLVMVWKRAAFIGPSTVFGSSSKLANVEQ WRCVTILRNHTGDVMDVAWSPHDVWLASCSVDNTIVIWNARKFPEMVTCLRGHTGLVKGL TWDPVGKYVASQADDHSLRVWRTMDWQMEANITKPFSECGGTTHVLRLSWSPDGQYLVSA HAMNNSGPTAQIVERGGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSAPKPGCPYCCC AVGSKDRSLSVWLTSLKRPLVVIHDLFDKSIMDISWTLTGLGMLVCSMDGTVAYLDFSLD ELGDPLNEEEKNSIHQNIYGKSLAITSTEAQLSTTIIENPEMLKYQQERQSSAQLGPSSA GPEASAPKLNSVMNGESLEDIRKNLLKKQVETRTPDGRRRITPLCIAQLDTGDFSPALFN SAPILPSGSSMSNQLTSQLSSDSSPGPASSLGLRPGHDPMLTSPPAGAATKGPEDNKDGA KSGLLLTSASKIEPMKALDSRFTERSKATPGVTATISSIAGLVPLDSRPKDGGGVSAPKD VKAKDDTSSDSEDKMASINKNLSFSKRKPELLMDGDGVVEKRKKGRPRKDKMAAPMAQPF MQMTPPAEREPSRVAAPPAALKLPTPSIKKAFSLQVSMEPSVFLEVENEVSLIAGSKLSQ LRCSRDGRDWNTLLPSSVVTAAGSSDVLAVACQDRMLSVFSSCGRRLLPAIQLATPASAL HCSAHFVMALTAGATLSVWDVHKQKALVKNESLLSILSGADTTVSQSLLTQQGVPVIGLS NGKCYCFSSSLETWTLIADKGDSMVQCADFRSCLPTHDAPVSSGPLAVMQGRNLNAGRLA SRLSSTPHHLQQSMTLAFLENQLASALTLQSAQEYRYWLLIYARFLVNEGSEHRLRELCQ ELLGPVHKSAATAWEPTTLGLRKRELLREVLPVIVENLRFQRLFTEYQDQLELLRNK NT seq 3054 nt NT seq  +upstreamnt  +downstreamnt atgaagctgctgaagccgagctgggtgagccacaacggcaaacccatattttccgttgac atccaccccgatgggacaaagtttgcaaccgggggtcaaggagaggattctgggaaggtg atgatctggaacatggcgccggtcctccgagacgaggacgagaagaacgagaatattccc aagatgctttgccagatggacaatcacctcgcgtgtgtgaactgtgtgcgttggtccaac aacgggctgtacctcgcatcagggggggacgacaagctagtgatggtgtggaagagagcc gcattcatcgggccgagcaccgtgttcgggtcgagcagcaagctggccaacgtggagcag tggaggtgtgtcaccatcctgaggaaccacactggagacgtgatggacgtggcgtggtct cctcacgacgtgtggctggcctcctgcagcgtggacaacaccatcgtcatctggaacgct cgcaagttcccagagatggtgacgtgtctgcgtggtcacaccgggctggtcaaaggtctg acgtgggacccggtggggaagtacgtcgcctctcaggccgacgaccacagcctccgcgtg tggaggacgatggactggcagatggaggccaacatcaccaagcccttcagcgagtgcggc gggacgacccacgtcctgcgtctgtcctggtccccggacggtcagtacctggtgtcggcc cacgccatgaacaactccggccccacggctcagatcgtggagcgaggcggctggaagacc aacatggacttcgtgggccaccggaaagccgtcacggtggtgaagttcaacccgaagatc ttcaagaagaagcagaagaacggcagcgccccgaaacccggctgcccgtactgctgctgc gccgtcggcagcaaagaccgctcgctctccgtctggctcacctccctgaagcgccccctg gtggtcattcacgatctgttcgataaatccatcatggacatctcctggaccctgaccggt ctggggatgctggtgtgttcgatggacgggactgtggcctacctggacttctcactggac gaactgggagaccctctgaacgaggaggagaagaacagcatccaccagaacatctacggg aagagcctggcgatcaccagcaccgaggcccagctctccaccaccatcatcgagaacccg gagatgctgaagtaccagcaggagcgccagagctcggcccagctggggccgagcagcgcc gggcccgaggcctcggcccccaaactcaacagcgtgatgaacggagagtctctggaggac atcaggaagaaccttctgaagaagcaggtggagacgagaaccccggacggcaggagacgg atcacgccgctctgcatcgctcagctggacaccggcgacttctccccggcgctcttcaac agcgcccccatcctgccctcgggctcctccatgtccaaccagctcacctcccagctcagc tccgactccagcccgggaccggcgtcgtctctggggctgcggccgggccacgaccccatg ctcacctcgcctccggccggcgccgccaccaagggcccggaggacaacaaggacggagcg aagtccggtctgctgctcacttccgcctccaagatcgagcccatgaaggcgttggactcc aggttcacggagaggtcgaaggccacgccgggggtcaccgccaccatctcctccatcgcc ggactcgtgcctctcgacagcaggccgaaggacggcggcggcgtctccgccccgaaggac gtgaaggccaaagacgacaccagcagtgacagcgaggacaagatggcctccatcaacaag aacctgtcgttcagcaagaggaagccggagctgctgatggacggagacggcgtggtggag aagaggaagaagggacggcccaggaaagacaagatggccgcccccatggcccagcccttc atgcagatgactcctccggcggagcgggagcccagccgggtggcggctcctccggcggct ctcaagctaccgacgccgagtataaagaaggccttcagtctgcaggtgagcatggagccg tcggtgttcctggaggtggagaacgaggtgtcgctgatcgcgggttcgaagctcagccag ctgcgttgctccagagacggacgggactggaacacgctgctgcccagctcagtggtcacg gccgcagggagcagcgacgtcctcgccgtcgcctgtcaggacaggatgttgtcggtcttc tcttcctgtgggcggaggctcctccccgccatccagctggccacgcccgcctcggctctg cattgctccgcccacttcgtcatggctctgacggccggagcgacgctgtccgtctgggac gttcacaagcaaaaggctctggtgaagaacgagtcgctgctgagcatcctgtctggtgcc gacaccaccgtgtctcagtctctgctgacccagcagggggtccccgtcattggactgtcc aacgggaagtgctactgcttcagctcgtccctggagacctggactctgattgccgataaa ggagactccatggtccagtgtgccgacttcaggagctgcctgccgacccacgatgcacct gtgtcctcggggccgctggctgtcatgcagggacgcaacctcaatgccggtcgcctggcg tcccgcctgtcctccacccctcaccacctgcagcagagcatgacgctggccttcctggag aaccagctggcgtccgccctgaccctgcagtcggcgcaggagtaccgctactggctgctc atctacgcccgcttcctcgtaaacgaaggctcagagcatcgtctcagagagctgtgtcag gagctgctgggtcccgtccacaagtcggcggccacggcctgggagcccaccactctgggt ctccgtaagcgcgagctgctgcgggaggttttgcccgtcatcgtggaaaaccttcgattc cagagactgttcaccgaataccaggaccagctggagctgctgcgcaacaaataa

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