Cyclopterus lumpus (lumpfish): 117736366
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Entry
117736366 CDS
T09199
Symbol
efna5b
Name
(RefSeq) ephrin-A5b isoform X1
KO
K05462
ephrin-A
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117736366 (efna5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
clum04052
]
117736366 (efna5b)
00536 Glycosaminoglycan binding proteins [BR:
clum00536
]
117736366 (efna5b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
117736366 (efna5b)
Cytokines and neuropeptides [BR:
clum04052
]
Cytokines
Growth factors (RTK binding)
117736366 (efna5b)
Glycosaminoglycan binding proteins [BR:
clum00536
]
Heparan sulfate / Heparin
Axon guidance molecules
117736366 (efna5b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
Others
117736366 (efna5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
117736366
NCBI-ProteinID:
XP_034397555
Ensembl:
ENSCLMG00005014859
LinkDB
All DBs
Position
9:19219432..19306943
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AA seq
230 aa
AA seq
DB search
MLQMEMVIFLCLVLLMCVFSQEPSSKVVADRFAVFWNRTNAKFHRGDYHIDVCINDYLDV
YCPHYEESVPEERTERYVLYMVNYDGYSTCDHTAKGFKRWECNRPHSPNGPLKFSEKFQL
FTPFSLGFEFRPGREYYYISSTIAENGRKTCLKLKVFVRPSNSCVKTIGVHDRVFDVNDK
VDNTLEPRDDTSHEPAEPSRSDETNAAPHLQNTSPLPALLLVCLSALFTL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaatggaaatggtcatcttcctctgcctggtgctgttgatgtgtgtatttagc
caggagcccagttccaaagtggtggccgaccgcttcgccgtcttctggaaccggaccaac
gccaagttccaccgtggagactaccacatcgacgtgtgcataaacgactacctggacgtg
tactgtcctcactatgaagagtcggtgcccgaggagcgcaccgagcgctacgtcctctac
atggtcaactacgacggctacagcacgtgcgaccacaccgccaagggcttcaagcgctgg
gagtgcaaccggccgcactccccgaacgggccgctcaagttctccgagaagttccagctc
ttcaccccgttctccctgggctttgagttccgaccgggcagagagtactactacatatcc
tccaccattgctgagaacgggaggaaaacatgcctgaagctcaaagttttcgtccgacca
tcaaacagctgtgtgaaaactataggcgtacatgaccgcgtttttgatgtaaacgacaaa
gtagacaatacattagaaccacgagacgacaccagccacgaaccggctgagccttcccga
agtgacgagacgaatgctgcgccgcacctgcagaacacaagtccactcccggctttgttg
ctggtctgcctatcagcactcttcactttatag
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