KEGG   Cyclopterus lumpus (lumpfish): 117736382
Entry
117736382         CDS       T09199                                 
Symbol
nol6
Name
(RefSeq) nucleolar protein 6
  KO
K14544  U3 small nucleolar RNA-associated protein 22
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    117736382 (nol6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:clum03009]
    117736382 (nol6)
Ribosome biogenesis [BR:clum03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    117736382 (nol6)
SSDB
Motif
Pfam: Nrap_D4 Nrap_D5 Nrap_D2 Nrap Nrap_D3 Nrap_D6
Other DBs
NCBI-GeneID: 117736382
NCBI-ProteinID: XP_034397578
Ensembl: ENSCLMG00005020818
LinkDB
Position
9:14625027..14638653
AA seq 1145 aa
MKKKLTVTEDPAEMIPSESHATVEENEAPVKAKRSKPEMAGGEEEVYHPVKLSRSDLYRP
PTAEELNQLKETESLFHCSLLKMQMEELLKEVALSERRKQQIDSFIQAVTKLLQTVPNSS
DVELSDLSWLSSAVKVPFLLVPKTTKGKFHMAPPASVDLIGSYPLGTCTKPRIMVDLAVT
IPADVLHPKDVLNQRYPRKRALYLAGLAQCFASSSEIGSMRYSCLHGNRLRPILLLTPPG
KDSSSFTLRIHVCPPPGFFKPSRFNPQRNNIRTEWYSGLQNPQCESGEPPTPHYNSSVLG
DLLPRAHLQFLSAVSSQCSAFADGVALLKVWLRQRELDQGTGCFNGFLASMLLAYLLTTH
RISNSMTAYQQLRNSLNFLASTDLTVNGISLARDPDSTAPSLAEFHTAFQVVFVDPSGHL
NMCADITACTYKQLQHEATLSMQFWDNPTVDGFHSLLMTPKPMIRTSDHVFQLCELVKLQ
SSCKKMNLLSELMDHSGNYVHTALPFIVSLLQRGLGQRIHLLTHSLSPDPEWSVESEAPK
HRAQPPLAFGLLLSPELAASVLERGPAADSPMAAEFRQLWGSRSELRRFQDSSITEAVLW
DGESMCQKRLVPRQIITHLLQLHADIPESCMRYVGAMVDDVIKTGSEVPSTGDEESLLVV
QSYDDLSRKLWRLEGLPLSITAVQGAHPALRYTQVFPPVPLKVDYSFFDREKTSRSLVPK
EGKPCPAYITPITVICHMEGSGKWPHDRLAIRHIRTAFHICLGELLKKHHNYTCRPCPTH
LDVWKDGLVFRIQVAYHREPQVLRESVNAEGLLIVRDNEEAQALEMATIHKPLLTSTLHG
LQQQHQCFGGVCRLAKRWLGAQLFSDAITEDTTDLLVASLFLQPAPFTPPGSPQVGLLRF
LCLLSSFDWRDNPLVVNLNNQLAATDYTEIKNDFMASRESLPVLFIATPKDKKQSLWTKR
APSVQMLQRVVMVAAESLKLLEHQLMDRDQIQDVKVVMRPPLDAYDVLIHLNPKQVPLLT
QAVDPPTVTFSRGIIAGKVAQSGGALPVIDYNPVTLYLAELRDAFGELALFFCDPHGGTV
IAVLWKPKAFIPVPFKTSQMSARRVEVTGEEANTIPNIEAILEDFWVMGKGLIKSVEART
EKWSF
NT seq 3438 nt   +upstreamnt  +downstreamnt
atgaaaaagaagctgacagttacggaggacccagcagagatgattccctcagagagtcac
gcgacggtggaggaaaacgaggctcctgtgaaagccaaaaggagcaaacctgagatggct
ggaggggaggaggaggtctaccacccggtgaagctgtcccgaagtgatctgtacagacct
ccgacagcagaggagctaaaccagctgaaagagacggagagcctgtttcactgcagcctg
ctcaaaatgcagatggaagagctgctgaaagaggtcgccctgagtgagcgtaggaaacag
caaatagattccttcattcaggccgtcaccaagctgctccagaccgtaccgaattcctca
gatgttgagttaagtgacctgtcttggctgtcaagtgcagttaaggtcccttttctcctg
gtgcccaaaacaacaaaaggcaaattccacatggcaccccctgcttctgttgatcttatt
ggcagctaccccctgggaacctgcaccaaaccacgcatcatggtggacctggctgtcaca
atcccagctgatgtcctccacccaaaggatgtcttgaaccagaggtatccgaggaaaagg
gctctctacctggccggtctggcccagtgtttcgcatcctcctctgagatcggaagcatg
cgttactcctgtctgcatggcaacagacttcgacccattctgctgctcacccctccaggt
aaagactcttccagcttcaccttacgtattcatgtctgtccgcctcctggattcttcaag
cccagtcgtttcaacccacagaggaataatatccggacagagtggtacagcggattgcag
aacccccagtgtgagagcggcgaaccccccactccgcattacaatagctctgttctgggg
gatttactgcccagggctcacctccagtttctttctgcggtcagctcccaatgctcagct
tttgctgatggagtggctttgctcaaagtctggcttcggcaaagagagcttgaccaggga
actggttgttttaatggcttcctggcttcaatgttgttggcttatctgctgaccactcac
agaatcagtaactccatgacagcctatcagcagcttcgaaacagcttgaacttcctggca
tctacagacctgacagtgaatggaattagcctggccagagatcctgactctacagctcca
tctcttgcagagttccacactgctttccaggttgtgtttgttgacccgtcaggacatctc
aacatgtgtgctgacataactgcttgtacctacaaacagctgcagcacgaggcaactcta
tcgatgcagttctgggacaaccctacggtggatggcttccacagccttctcatgacaccc
aaacccatgataaggacaagcgaccacgtattccagttatgtgagctggtgaagcttcag
tccagctgtaagaaaatgaatctcctcagtgagctgatggaccacagtggaaattatgtc
cacactgcactcccttttattgtgtcactgcttcagcggggactgggccaaaggatccac
ctccttacccactccctctcacctgaccctgagtggtctgtggagagtgaagccccaaaa
cacagagctcaacctcctctggcctttggtttgctcttaagtccggagctggcagcctct
gtcctggaacgaggcccagctgcagacagccccatggcggctgagttccgtcagctgtgg
ggttctcgctccgagctgcgtcgcttccaggacagttcgatcaccgaggccgtgctgtgg
gatggagagagcatgtgccagaagagactggtccccaggcagatcattacacacctgcta
cagctgcatgcagatatccctgaatcctgtatgcgatatgtgggggcgatggtggatgac
gtcatcaaaacgggaagtgaggttcctagtactggagacgaggagagtttgctagtggtt
cagtcctatgatgacctgagtagaaaactgtggcggctggaaggtctgcctctctccatc
acagcagtgcaaggagcccaccctgcacttagatacacacaggtctttccccctgtgcca
ctcaaggtggactattccttctttgacagagaaaagacttccagatcattggtgccaaag
gaaggcaaaccgtgccctgcttatatcacccctatcacagtgatttgccacatggaaggg
agtggaaagtggcctcacgatcgcctcgccatccgccacatccgaactgccttccacatc
tgcctgggagagttactcaagaagcatcataattatacatgcaggccctgccccactcac
ctagatgtctggaaggatggcttggttttccgcatccaggtggcataccatcgcgagcct
caggtgctgagggagagtgtgaatgctgaggggctgctgatcgtaagggacaatgaggag
gctcaggctctggagatggccaccattcataagcctctacttaccagcacattgcatggg
ctccagcagcagcaccaatgtttcgggggagtgtgtcgcctggccaaacgctggctgggg
gctcagctcttcagcgacgccatcacagaggacacaacagacctgctggtggcgtcgctt
ttcctgcagcctgcaccctttactcctccgggttctcctcaggtcggcttgcttcgtttc
ctttgtctgctctcttcctttgactggagagacaacccgttggtcgtcaacctcaacaac
cagcttgcagccaccgactacacagagatcaagaatgacttcatggcctccagggagtct
ctgcctgtcttgtttatagctacgcctaaagacaaaaaacaatccctgtggaccaagcga
gcacctagtgtacagatgctgcagcgtgtggtgatggtggctgcagagagtcttaagtta
ctggaacatcagctgatggacagagaccagatacaagatgtcaaggtggtcatgcgccct
cctctggatgcctacgatgtgttgattcacctgaacccaaagcaggttcccctgctcact
caggcagtggaccctcccactgtcaccttcagcaggggcatcatagctggcaaagttgcc
cagtctggaggggccctgccggtcatcgactacaaccctgtgaccctctacctggcagag
ctcagggatgctttcggagagctagctctcttcttctgtgatccccatggcggaaccgtg
atcgcggttttatggaagccaaaggccttcatcccagtgcccttcaagacatcgcaaatg
tctgctcggagagtggaggtgactggggaggaagcaaataccattcccaacatcgaagca
atactggaggacttctgggtcatggggaagggcttgatcaagtcagtggaagccaggact
gaaaaatggtcattttag

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