Cyclopterus lumpus (lumpfish): 117736456
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Entry
117736456 CDS
T09199
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117736456 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117736456 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117736456 (usp30)
04121 Ubiquitin system [BR:
clum04121
]
117736456 (usp30)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117736456 (usp30)
Peptidases and inhibitors [BR:
clum01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117736456 (usp30)
Membrane trafficking [BR:
clum04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
117736456 (usp30)
Ubiquitin system [BR:
clum04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117736456 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
117736456
NCBI-ProteinID:
XP_034397704
Ensembl:
ENSCLMG00005020838
UniProt:
A0A8C3AS07
LinkDB
All DBs
Position
9:18287756..18293454
Genome browser
AA seq
504 aa
AA seq
DB search
MLWCRPESSDKLVGEFLGTGPIVRNKMIKNWGVIGGIAAAIAAGVYVLWGPITEQKKKKR
GMVPGLLNLGNTCFLNSLLQGLAACPSFIRWLEMFSCSPMIQSCRDNQMSTTLLQLLNAL
SSDQPGEEDVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVLTSSLEEERDRQPKVAHLF
DMQSLENLPDQVEETMTCRSRAPLHPIPSPWKSQHPFHGRLTSNMSCKRCEQQSPVRYDS
FESLSLSIPLPQWGRLISLDQCLQHFISSETIKEVECENCTKLQQGNTVNGQVLESQRTT
FIKQLKLGKLPQCLCIHLQRLTWSSEGTPIKRQEHVQFTEHLSMDRYKHNAATHRRQRIK
CAPIPIKAESSDDSMEKLSANGTEAEHRYNNNKPFSNGTCSSVLLQSPGVNPQLGLTCDY
RSTEYLFQLTAVLVHHGDMHSGHFVTYRRSPSSPRTSSPISSQWLWVSDDSVRKASQHEV
LSCNAYMLFYERVRRVSLALHSEE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggtgcagaccagaaagctcggataagctggtcggagagttccttggcactgga
cccatagtcagaaacaagatgataaaaaactggggcgtcattggtgggatagctgctgcg
attgcagctggagtttatgttctgtggggtccaattacagagcaaaagaagaaaaagaga
ggtatggttcctggtctgttgaatttaggcaacacctgcttcttgaactctttgcttcag
ggtttggcagcatgtccatccttcatcaggtggctggagatgttttcatgttcccctatg
atccagtcatgcagggacaaccagatgtccacaacactgcttcagcttctcaatgctctg
tccagtgatcagcctggggaggaagatgtacttgatgccgggtgcctcctggatgttctc
agactctaccggtggcacatcagttcatttgaagagcaggatgcacatgaactttttcat
gtccttacatcttctctggaggaggagcgggatcgtcaacccaaagtcgctcacttgttt
gacatgcagtccctcgagaaccttcctgatcaagttgaggaaactatgacctgcagaagt
cgagcccctcttcatcctataccaagtccctggaagtctcaacatccttttcatggtcgt
ttaacaagcaatatgtcgtgcaagcgctgcgaacaacaaagtccggtgcggtatgactca
tttgagagcctctccctgtccatccctttacctcagtgggggagacttatctcgttagat
cagtgtcttcagcattttatctcctctgaaactatcaaagaagtggagtgtgaaaactgc
accaagcttcaacaaggcaacacagtaaacgggcaagttctggaaagccagaggacaaca
ttcattaaacagctaaaactgggaaagctcccccaatgcctctgtatccatttacaaaga
ctgacgtggtccagcgaaggaacccccatcaaaagacaagagcatgtgcagtttacagag
catctatcgatggaccgctacaaacacaatgctgccactcacagaagacagcgaatcaaa
tgtgctccgatccccataaaggcagaaagttcagatgattcaatggaaaagctctctgct
aatggcactgaagcagagcatcgatacaacaacaacaaacctttttccaacggaacatgt
tcgtcggtacttcttcagtctcctggcgtgaacccccagctcggcctcacatgtgactac
aggtctacagagtacttgttccagctcacggctgtgctggtccatcacggtgacatgcac
tcaggacatttcgtcacgtaccgccgcagcccttcctcacctcgcacctcttcacccatt
agctcccagtggctttgggtgtcagacgactctgtacgaaaagccagccagcatgaggtg
ctgtcttgcaacgcctacatgctcttctacgagagagtccggagagtgagcctggctctg
cactcagaggagtga
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