Cyclopterus lumpus (lumpfish): 117736495
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Entry
117736495 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 28-like
KO
K24936
tetratricopeptide repeat protein 28
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
clum03037
]
117736495
Cilium and associated proteins [BR:
clum03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
117736495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_16
TPR_17
RPN7
TPR_11
TPR_14
TPR_19
TPR_9
TPR_6
TPR_NPHP3
PUB
BTAD
HlyE
ARM_TT21_5th
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
117736495
NCBI-ProteinID:
XP_034397759
Ensembl:
ENSCLMG00005008404
LinkDB
All DBs
Position
9:12412463..12568210
Genome browser
AA seq
2449 aa
AA seq
DB search
MEKQATRKEKFSIFGSRTAGIPMRCVSGVQEARYGLSKAEFMEKVQQSNDACQRGDFQAA
VHLYTNALQADPQNCILYSNRSAARLKLGQHQAALEDAEKACELNPKWPKAYFRQGVALQ
YLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDKSPFV
VVSVIGQELLTASHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSTGYM
QQDLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRNQLVLAMKLKDREAASMAL
SSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFDNAVQSH
EQHLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELSQELEEKSIEMRAY
AGLGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLH
KTHLAIVQELNDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTH
GNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYY
EQYLRLSPDLQDMETEGKVCHNLGYAHYCLGNYQDAVKYYEQDLALAKDLHDKLSQAKAY
CNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVAGAIQFY
EQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHTQELEVYQELGDVSGECKAH
GHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPVVEAQVYGNMGITKMNVGVMEEAIGYL
EQQLATLQQLSGNEALMDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRMQDQE
KAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGDCGGKAQAYGELGALHSQLGNYEQAI
SCLERQLVIARDTQDRLLEGDASCGLGVVYQSMGEYETALRCHQSDLEIAEEAGSAARQA
RAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAV
MYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHS
TDYKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPY
TPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGMSEGGSDFQ
EGSVSGVVSGSSLEQHIASAREALGVESYYSRGCSSSETESEAGDLLDQQFEELNNKLNS
VTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGNSSLPRRSSNLGKPPLRALYDL
LIAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIH
GLGSSAKAHPRRSGPAPCGGVSMAAVVGNPRLPSPVMDRWLWGPMPSAEEEALMVAELLG
CQPLAGSAATKERVMSALTQAECAHFATHISWKLAALVLTPNPESTKGSIGSGYTIPESL
HMQDDSSDVESICDSPPLQEFLLTAADILDLRLPIKLVVLGSYQESSSKVTADGVVGLTR
AFLAAGAQCALVSLWPVPVAASKVFIHAFYTALLNGTKASAALADAMKTVQSSKQYSHPS
NWAGYMLIGNDVKLNSPSSLIGQALAEILQYPDRARDALRVLLHLVEKSLQRIQNGQRNS
MYTSQQSVENKVGGVPGWQALLTAVGFRLDSVGTGMPSAVFFPTADPGDRLQQCSTTLQS
LLGLPPPALQALCKLITASEAGEQLINRAVKNMVAMLHQVLVQLQTGEKEQDFSLLPIQV
SISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKIANRRTLHFALQSLLALFDSTEL
PKRLSLDSSSSLESLASAQSVSNPLPMGYSSLPFSPPCLDSQASDAISVYSLSSVASSMS
FVSKSECDFLGHRQRGGVTAHYSIHKHPHVPRSRSSPHGAAAAAVAGARGDDEEYEGFSI
ISSEPLGSHCDSLPLPLGHSQRHHRGGRGVVGGSSTGAGRGYTVSVSSRGSVSTPTSPVK
TCLVASPNSPFQKVGKVSSSDTGESDQSSTETDSTVKSQEEKIVPMDPQELAQKILEETQ
SHLRAVGSLQRAGPEGATAGGTSARSSAFRSSETSAFSRPNSSASGRAQSSPRPKPPSRS
SSLQKISSGYNSPAISESSQKEGSHPSPTLDSHAQFRLKYPSSPYSGHISHSPSNVSPSS
GHQSPAGSAPSPALSYSSTGSACSTSADIPDLDRLRRGVIDEKVQAIHNLKTFWANAAAQ
QHLGPVRGIHGTPGPLASASRDVLSLLNLSPRHCSPNDTQDSLELRELGLQSLDRGSKNN
GHHCSNPRKMAPSPTISTSSSPGPRSIRLPAGNGYKFLSPGRFFPSSKC
NT seq
7350 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaagctactcggaaagaaaagttttccatcttcggttctcggacagcgggc
ataccaatgagatgtgtttctggagtacaggaggccaggtatggtctcagcaaagcagag
ttcatggagaaagtgcagcagagcaatgacgcttgtcagcgtggtgactttcaggcagct
gttcatttgtacactaatgccttgcaagctgacccacagaactgcatcctctatagtaac
cggtcagcagcgcggctcaaactgggacaacaccaggcggcactggaggatgctgaaaaa
gcttgtgagctcaatcccaagtggcccaaggcatacttccgacagggtgttgcccttcag
taccttggtcgccatgccgacgcactggccgccttcgcctccgggctggcccaagacccc
aagagcctccagctactggtgggaatggtggaagccgccatgaagtcgccgctacgagag
tctctcgagcccacctatcagcagctgcaaaagatgaagctggacaaaagtccctttgtg
gtggtgtctgtgattggccaggagctgctgaccgcaagtcaccacacagcctctgttgtg
gtgctggaagccgctttgaagatcggcacatgcagcctcaagctacgtggctcggtcttt
tcggccctcagcagcgcccactggtccctgggcaacacagagaagagcactggctacatg
caacaggacttggaggtggccaagaccctaggtgaccaaacaggggaatgccgtgctcat
gggaatctgggctcggcattcttctccaagggaaactatcgagaagcgctgaccaaccat
cgcaaccagctagttttggcaatgaagctaaaggacagagaggctgcttcaatggcgctg
agcagcttgggccatgtatatacagccattggcgactatccgaacgccctggccagccac
aaacagtgtgtcctactggccaagcagtccaaggatcagctgtctgaggctcgcgagctg
ggaaacatgggggccgtctacattgccatgggagactttgacaatgctgtccaaagccac
gagcagcatctgggcattgccaaggccctggaaaataaacgagaggaagctcgtgcttat
agtaacctaggcagtgcctaccactaccaccgtaactttgacaaggccatgtcctaccat
actcacgttctggagctctcccaggagctggaagaaaagtccattgagatgagagcctac
gcaggactgggtcatgctgctcgctgcatgcaggacttggagagagccaagcagtaccat
gaacagcagctgtctatagctgagggtttgaaggacagggccgcagagggaagggcctcc
tccaatctgggcataatccaccagatgaaaggggattatgagactgcactgaaactccac
aaaacacacctggccattgttcaagagctgaatgactatgctgctcagggccgggcctat
ggtaacatgggtaatgcctacaacgccctgggagccttcgatcaggctgttcgctatcac
cgccaggagctgcagatatccatggaagtcaatgaccgggcctcgcaggcctccacccat
ggaaatctggctgtggcttaccaagccctgggagcccatgaccgtgctctgcaacattac
cagaaccacctcaacatcgctcgtgaactccgagatgtccagagcgaggcgcgggctctg
ggcaacctcggcaacttccactgctctcgaggagagttccctcaggccgtgccctactat
gagcagtacctccgcttgtccccggacctccaagacatggaaaccgaaggaaaagtttgt
cacaatctgggttatgcccactactgtctgggcaactaccaggatgccgtcaagtactat
gagcaggacctagctctggccaaggaccttcatgataaactgagtcaggccaaggcctac
tgtaaccttgggttggcattcaaggccctgggagacttcactaaggcagaggagtgtcag
aaatacctgctgtcactggcccaatccctgaacaatgcccaggctcgcttcagagcactg
gggaacctcggggacatatttgtctgtaaaaaagatgtggctggagccattcagttttac
gagcagcagctggccttagctcaccaggttaaggagcgtaggatggaggcctgtgcctat
gctgcccttggggccacctacagacttgtgcagaaatatgacaaagcactgggctaccac
acccaggagctggaggtgtatcaagagctgggcgacgtgtcaggagagtgcaaagcccat
ggtcacctggcagctgtctacatggccctgggaaagtacgctatggcctttaagagctac
gaagagcaattagagcttgggcggaggctgaaggatcctgtcgtggaggctcaggtgtac
ggaaatatgggcatcactaaaatgaatgtaggcgtgatggaggaagccattggctacctg
gagcagcagctggccactttgcagcagctgagtggcaacgaggcattgatggacaggggc
agggcctatggaaacctgggagactgttatgaggctctgggagactttgaggaagccatc
aagtactatgaccagtatctgtcagtggcccagagcctcaaccgcatgcaggaccaggag
aaggcctacagaggcttaggcaacggacacagggccatgggaaacctacagcagtcactg
gtgtgttttgagaagcggctagtagtggctcatgagctgggggactgtggaggcaaggct
caggcctatggtgaactgggcgcactacacagccagctgggaaattatgagcaggctatc
tcctgtctggagcgtcagctggtaattgcccgtgacacccaggacagacttctggagggg
gatgccagctgcggtttgggcgttgtatatcaatctatgggagagtatgagacagccctg
cgatgccaccaaagtgacctggagattgcagaggaagcaggaagcgccgcgcgccaggcg
cgcgcctatgggaacttgggtcttacctatgagtcgcttggaaactacgagcgggcagtc
gtgttccaggaacagcacctaagtgttgcggctcagactaatgacttggctgccaagaca
ctggcctatggcagcctggggagaacacaccacgcactgcaaaactactcacaggctgtc
atgtacctgcaagaaggcctgcggcttgcagagcagctggctcggcgtgaggacgaggca
aagatccggcatcgtcttgggctctctctgtgggccagtgggaatctggaggaggctcaa
catcagctctaccgggcttctgcactgtttgagaccatccgccatgaagcccagcacagc
acagactataaactctccttgtttgatctgcaaacctcctgctaccaggcactccaaagg
gtccttgtcagcctaggccaccatgatgaagctctggcagtggcagagcggggtcgtacg
cgagcctttgctgacctcttggtagagcggcagacaggccagcaggactcagatccctac
accccagtaacagtggagcacatcttggacacggtcaacagccagagagccttggtgctt
tatttctccatggctgctggctacctgtacagctggctgctggctccaggagcaggcatc
ctgaagtttcatgaggtgtacctaggcgagggcatgtcagaaggaggttcagatttccag
gagggaagcgtcagtggggtggtcagcggctcttcattggagcagcacattgccagtgcc
cgtgaggctctgggagtagagtcttattacagcagaggatgttcgagcagcgagacagag
agtgaggcaggagatttgttggaccaacaatttgaggagctcaacaacaagcttaactcc
gtcactgatccaaccggcttccttcgcatggtgtccagaaacaacctgttcaacaggagt
tgccagagtatgacaagcctgtttagtaacaccatgtcacctgccaaagatggtaactct
tccctgcctcgccgctccagcaacctcggaaagcctccacttcgggcactttatgatttg
ctcattgcacctatggaggggggcttgatgcactcgagtgggccagttggcagacacaga
caactggtgatggtgctggagggagaactgtacctcattcccttcgccttgctaaaagga
agctcttctaatgaatacctgtatgagcgcttcagcctcattgctgttccctccatccat
ggccttggatccagtgcaaaggctcacccccggcgctccggaccagctccatgtggcggt
gtctcaatggcagcagtggtggggaaccctagactgccctcgcctgtgatggaccgctgg
ctgtggggacccatgccctctgcagaggaggaggctctaatggtggctgagttgctgggc
tgtcaaccactggccggctctgctgccaccaaggaaagggtgatgagtgcccttacacag
gccgagtgtgcccactttgccacccacatttcctggaaattggcagctctggtgctcacc
ccaaaccctgaaagcacgaagggctccattggaagtggctacaccatcccagagtctctc
cacatgcaggatgacagcagtgacgtggagagcatctgtgacagtccgcccttgcaggag
ttcttgctcacagctgcagatatattggacctgaggttgcctatcaagctggtggtgcta
gggtcgtaccaggagtccagcagcaaagtgacagcagatggtgttgtgggattgaccagg
gccttcctggctgctggtgctcagtgtgctcttgtgtccttgtggcctgtccctgtcgca
gcctccaaagtttttatccatgccttctacactgcactgctcaacggaaccaaggctagc
gcagcactggcagatgcgatgaagactgtccagagcagcaagcagtactcgcacccctcc
aactgggcaggatacatgctgattggcaatgatgtgaagcttaacagcccatcttccctc
attggccaagctttggcagagattctacagtatcctgatcgagcgcgtgatgctcttaga
gttttactccacctggtggagaagtctcttcagaggatacagaacggccagcgtaactcc
atgtatacatcccagcaaagtgtggagaacaaggtggggggggtccctggctggcaggcc
ctgttgacagctgtgggcttccgtctggactctgtgggcaccggtatgccttctgcagtc
ttctttcccactgctgatcctggagacagacttcagcagtgcagcaccactttacaatca
ctactgggtctgccgccgccagctctccaggctttgtgcaaactcatcacagcttcagag
gcaggagagcagctcatcaatcgggctgttaaaaatatggtggcaatgctccaccaggtg
ctcgtgcaactccagacaggagagaaggagcaggatttctccctcctgcccattcaggtg
tccatcagtgtgcagctgtggaggctgccaggatgccatgaatttctggctgcgcttgga
tttgacttatgcgaggttggccaagaagaagtggtgctgaagacaggcaagatagccaac
cgccgcaccttgcactttgctctccagtctctgctggcactgtttgactccacagaactg
cccaagcgtctgagtctggatagctcatcttcccttgagtcgctagcttcagcccagtct
gtgtccaaccctcttcccatgggatactcaagccttcccttctctcctccttgcctggac
agtcaggcatcagatgctatctctgtctatagcctaagttctgtagcctcctccatgagc
tttgtttccaagtcagagtgtgatttcttaggtcatcggcaacgcggtggggtcacagca
cactactctatccacaaacaccctcatgttcctcgtagtcgctcctctcctcatggagca
gctgctgctgcagtggcaggagctcggggagatgatgaggaatatgagggcttttccatt
atcagcagcgagcctctgggaagccactgtgactctctgcccctgccactaggccacagc
cagcgccaccaccgaggaggcaggggggtagttggtgggtccagcacaggagcagggaga
ggctacactgtatcagtatcgtcaaggggcagtgtcagcacccccacttcccctgttaaa
acatgtctggtggccagcccaaactccccattccagaaggttggtaaggtgagcagctca
gatacaggtgaatctgaccagtccagtaccgagacggatagtactgtcaagtctcaggaa
gagaaaattgtccctatggatcctcaagagctggcccagaagattctggaggagactcag
agccatctccgagctgtaggtagtcttcagcgggctgggccagagggtgcaacggctgga
ggaacatcagcacggagcagcgccttccgttcttctgaaactagtgcattcagccgtcct
aacagcagtgcaagcggcagagctcaatcttccccaaggcccaaacctccctcccgttcc
tcttcgctgcagaaaataagctctggctacaatagccctgcaatctctgagtcttcccaa
aaggagggcagccatccatcacccactctggacagccatgcacagttcagattaaagtat
ccaagctccccatacagcggccacatctctcattccccgagtaatgtgtctcccagttct
ggtcaccagtccccggctggtagtgctccatccccagccctgtcgtactcctctacaggc
tctgcctgctctacatcggcagatatcccagacttggaccggctaagaagaggagtcatt
gatgaaaaagtccaagctatccacaatctgaagaccttttgggctaatgctgcagcccag
caacatctaggtcctgtccgaggcatccatgggactcccgggccccttgcttctgccagt
agagatgtactgagccttctgaacctctctccacgccattgctctcctaatgatacccaa
gacagcctggagctgcgagagctggggctgcaatcactggataggggcagcaagaacaat
ggacaccactgctccaaccctagaaaaatggccccatcacctactatttccacaagcagt
agccctggtcctcgttctatccgactacctgctgggaatggatacaagtttctgtcgcct
ggaagatttttcccttcctctaaatgctga
DBGET
integrated database retrieval system
