Cyclopterus lumpus (lumpfish): 117736515
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Entry
117736515 CDS
T09199
Symbol
sorbs3
Name
(RefSeq) vinexin isoform X1
KO
K23709
vinexin
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117736515 (sorbs3)
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
117736515 (sorbs3)
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Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
Sorb
ATP_sub_h
DUF1192
Motif
Other DBs
NCBI-GeneID:
117736515
NCBI-ProteinID:
XP_034397787
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Position
9:12992378..13013477
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AA seq
735 aa
AA seq
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MSLQVLNRTITDHMQSQQCVEVVGDTNGSRVIFTEEPGVSSGQQILRSPELTHEVVISPG
LPTPPLSPFRSTGLPFGEYKLSDVNGSGPTTLSFGSYYGPSQLHGGLSNGDQGSSTLSRS
WTPTREERLIKFSGIGPVDETGMPIASRSSVNKPRDWYKSMFRQIHKKPEESDLEDSERW
SVERLQLSANTEESNESDKNLFRLTPHGALPDWSEDVDKVSDPGKQPPEPRSIFDFEPGK
SSTSGIHSQVHVSPKKQPDTAKSPSIEASLVSELSRFEAELDSEIEGLEKSLSQKKQHRG
RGEEARGGDPVTAPKTETTYYSNSSAARPPVHHSVGTSLTSAPTYVERLSPANDTMELPP
KKEEKRMKAARAKFNFQAQSPKELMLQKGDIVYIHRQVDANWFEGEHHGRAGIFPTSYVE
ILLPSEKPTPIKSPTLQVLDYGEAVALFNFNADLPVELSFRKGETINITRRVDEKWLGGR
ISGTTRSGIFPASYVQVNKMPRTKFSTDDFSPGPMSPGSPAPQSPGRPLHSPCPRSPLFP
FTPTSLSPKPEHSPLKPSSPVPYGSPVSQSRSPTQSPVAKETANRWPCKNASLSNQNSHW
TGTHSANHSSVARAASPSTQPSSSVHRAEASTANTSSPRYTEPSQSAIPNQSARFNPQGN
SLPQTQLPNNPDLTVVHRQPYKAVYNYKPQNSDELELREGDVVRVMEKCDDGWFVGTSER
THAFGTFPGNYVAPF
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcaggtacttaacaggaccataacagatcacatgcagtcgcagcaatgtgtg
gaagtggttggcgatacaaatggctcccgggttatcttcaccgaggagcctggagtttca
tcaggtcagcaaatcctaaggtctccagagctgacccatgaggtggttatctcccctgga
ctccctacgcctcctctgagcccttttcgctctacaggattgccatttggagagtacaag
ttgtcagatgtgaatggaagtggaccaacaactctcagctttggatcttactatggcccc
tcacagttgcacggtggcctgtccaacggtgaccagggctcgtccactttatcccgcagc
tggactcccacccgggaggagaggcttatcaagttctcaggaatcggtccagtggatgaa
actgggatgcccattgcctccagatcaagtgtgaacaagcccagagactggtacaagagc
atgttcagacagattcacaagaagccagaggaatctgatctggaggattcggagcggtgg
tcagtcgaacgcctccagttatctgccaacacagaagaaagtaatgaatcagacaagaac
ctctttagactgacgcctcatggagctctaccagactggagcgaggatgtagataaggta
tcagacccgggaaagcagccccctgaaccgaggagcatattcgactttgagcctgggaag
agcagcacctcaggaatccacagccaggttcatgtatctccgaagaaacaacctgacaca
gcaaagtccccatcaattgaggccagtctagtctctgagctgagtcggtttgaggctgag
ctggactcggagatcgagggcctggagaagagtctttcccagaagaagcagcatcgaggc
cggggtgaggaggccagaggtggggatccggtaactgctccaaagactgagactacatac
tacagcaattcatcagcagcaaggccgcctgtccatcactctgttggcacatcactgacc
tctgcccccacttatgtagaacgtctttcccctgcaaatgacaccatggagctcccaccc
aagaaagaagagaaaaggatgaaagcagcgcgagccaagttcaatttccaggctcagtca
cccaaggagctcatgctgcagaaaggcgacattgtttacatccacaggcaggtagatgcc
aactggtttgaaggagagcatcacggaagagctggcattttccccacatcttatgtggag
attctgcttccttccgagaagccgacgcctattaagtcccccactctgcaggtgttggac
tacggggaagccgtggctctgtttaacttcaacgctgacctacctgtggaactttctttt
cggaaaggtgagacgatcaatataaccaggcgtgttgacgaaaagtggttaggggggagg
atctcagggaccacccggagcggcattttcccggccagttatgtccaggtcaacaagatg
ccccgcaccaaattctcgactgatgacttctcaccaggccccatgtctcctggctcccct
gcacctcagagtccagggcgtccgctccactcaccctgcccgcggtcaccattgttccct
ttcacccccacttccctcagccccaaacctgagcactccccactgaagccgtcttcccct
gtaccttatggcagcccagtttcacagtcgcgctcccccacccagtcacctgtagccaaa
gaaacggccaatcggtggccctgcaaaaatgcttcactcagcaaccagaacagccactgg
actgggacacactccgctaaccacagctccgtggctagagctgcttcaccttccactcag
ccatcgtcgtctgtacacagagcagaagcttccacagcgaacacgtcgtctcccagatac
actgagccctcacagagtgccatcccaaaccagtctgcccgatttaatccacagggtaac
tccctgccacaaacgcaactgccaaacaatccggatttaacagtggtgcatcgccaacca
tataaagctgtttacaactacaaaccacaaaattcagatgagttggagctcagagaagga
gacgttgtaagagtgatggagaaatgcgatgatggctggtttgtaggtacgtcagaacgg
actcacgcttttgggacctttcctgggaattacgtggcacctttttga
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