Cyclopterus lumpus (lumpfish): 117736595
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Entry
117736595 CDS
T09199
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117736595 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117736595 (ppil2)
03110 Chaperones and folding catalysts [BR:
clum03110
]
117736595 (ppil2)
04121 Ubiquitin system [BR:
clum04121
]
117736595 (ppil2)
Enzymes [BR:
clum01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
117736595 (ppil2)
Spliceosome [BR:
clum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117736595 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
117736595 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
117736595 (ppil2)
Chaperones and folding catalysts [BR:
clum03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
117736595 (ppil2)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
U-box type E3
117736595 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
117736595
NCBI-ProteinID:
XP_034397924
Ensembl:
ENSCLMG00005014563
UniProt:
A0A8C2ZV11
LinkDB
All DBs
Position
9:4040163..4063726
Genome browser
AA seq
528 aa
AA seq
DB search
MGKRQHQKDKMYITCSEYTHFYGGKKSEIPKANFRRLPFDHCSLSLQPFEYPVCTDEGVV
FDLLSIMPWIKRYGTNPISGEKLEAKSLIKLNFAKNNDGKYHCPVLYNIFTNNSHFVAIK
VTGNVFSHEAVEQLNIKTKSFKDLLSDEPFARKDIIVLQDPTNLDKFNVSNFFHVRNNLK
VLDPDEEKAKLHPAYHLKTTNLETRETLAELYKDYKGDPLLASTMKESAAKKTDKLNAAH
YSTGRVSASFTSTAMTPATTQVAEAIADDTVRYRYVKKKGYVRLLTNKGDLNVELHCDKV
PKAGENFIRLCKKGYYDGTVFHRSIRNFMIQGGDPTGTGTGGESFWGKPFKDEFKPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCIYLDRKHTVFGRIVGGFEALTAMENVESDPKSD
KPKSEIKIITATVFVDPYEEADAQIAAEREKDVQKEEKEKQQFSIAQQKAKEEQVPKTFK
AGVGKYINPATKKRPVAEEESGPSTSGAAAAAPKKSKGKSSFGDFSSW
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacgacagcaccaaaaagataaaatgtacatcacatgttcagagtacacacac
ttttatggagggaagaaatcagaaatcccaaaagcaaacttcagacggcttccgtttgac
cactgcagcttgtccctgcagccgtttgagtatcccgtctgtactgatgagggagtcgtc
tttgacctgctgagcattatgccgtggatcaagaggtatggcaccaatccgatctccgga
gagaaactggaggcaaagtccctcatcaaactcaactttgccaagaacaacgatgggaag
tatcactgccccgttctgtacaacatcttcacaaacaattctcacttcgtggccatcaag
gtcaccggcaacgtgttttctcatgaggctgttgagcaactcaacattaagaccaaaagt
ttcaaagatctgctgagcgacgagcccttcgccagaaaagacatcatcgtccttcaggac
cccacaaacctggataaattcaatgtttccaacttcttccacgtaagaaacaacctgaag
gtgttggatcccgatgaggaaaaggccaagctgcacccggcgtaccacctgaagaccacc
aacctggagaccagggagaccttagccgagctgtacaaggactacaagggggatccgctc
ctggcctccaccatgaaggagtcggcagccaagaagacggacaaattgaacgccgcccac
tactctacaggcagagtttccgcctccttcacatccacggccatgacccccgcaacaaca
caagtagcagaagccatcgcggacgacaccgtgcgttaccgctatgtgaagaagaaaggc
tacgtccgtctcctcacgaacaagggggacctgaacgttgagttacactgtgacaaggtt
cccaaagccggagagaatttcatccgtctgtgtaagaaaggctactatgatgggacggtc
ttccacaggtccatcaggaatttcatgattcaaggaggggaccccacgggcaccggcaca
ggaggagagtccttctgggggaagcctttcaaggatgagttcaagcccaacctgtctcat
accggccggggggttctcagcatggccaactcgggtccaaacaccaacaagtcccagttc
ttcatcacgttccggtcgtgcatctacctcgacaggaagcacaccgtatttggaaggatt
gtcggtggcttcgaggccctcacagccatggagaacgtggagagtgatcccaaatcggac
aaaccgaagtcggagatcaagatcataacggcgactgtgttcgtggacccgtacgaagaa
gccgacgctcagattgcggcggagcgagaaaaggatgtgcagaaggaggagaaggagaag
cagcagttcagcatcgcccagcagaaggcgaaggaggagcaggtgccgaaaaccttcaaa
gcgggcgtggggaaatacatcaaccctgccacgaaaaaacgtcccgtggctgaagaggaa
agcgggccgtccaccagcggcgcggcggcggcggcgcccaagaagtccaaaggcaagagc
agcttcggagacttcagctcctggtag
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