Cyclopterus lumpus (lumpfish): 117736596
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Entry
117736596 CDS
T09199
Symbol
cep78
Name
(RefSeq) centrosomal protein of 78 kDa isoform X1
KO
K16765
centrosomal protein CEP78
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117736596 (cep78)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
clum03037
]
117736596 (cep78)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
117736596 (cep78)
Cilium and associated proteins [BR:
clum03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117736596 (cep78)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
SAM_TNK
LRR_4
Motif
Other DBs
NCBI-GeneID:
117736596
NCBI-ProteinID:
XP_034397925
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All DBs
Position
9:22881001..22889931
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AA seq
795 aa
AA seq
DB search
MVQDSAHIRRRSAQDFMACYDFACARQESVPLTAVRMNLDKGMLDFNGDRVKLPDWPPIL
SSICINKHLHHIAISSTYQTSLASGDTDRRHYKSSFRKRIPAIRSKDMTFKLCKALRECL
TVSSNLKTLQLNGLPLRERDLITLTKGFSKSVSLENLSLANCPISDEGLEVICQSVKYST
SIRTVDFTGCNLTWRGAEHMANIIKHQGMQRHGTAWAESLRYRKPQFEGMGGLRRVTLNC
NTLIGDRGAAALAHEVAEDLWVKALDLQRCGLSNEGARRLLEALKTNTALCVLDIRSNPL
IDKVLIKTVLERVLMNADGQSPEFCWIKPAASEPQKASGPKRRALPGTVRGKTTFRIAAR
KGTSPVGRSSGDAQTQKPFSHSGYVPWRAAARAGRQRGLPPGDCVMDQSFQGAATVKVTV
ESDSEGEEDEEGDEEVVVEGEKGPPSLGLQDRITGRKFDHMQMELKECRLRLAEERRARL
KAESRLMEHELENARLRDTNLSLSEALAATGSASAPPALGALEDEAVLESIESSFTKFHA
FLDLLKDAGLGQLASLAGIDKSDFHPPGRPQLSSTVGPYSDGAASPTGGERRDVRVTADA
SSSMRVGGVLADTITPRPPSSAREFLREDRLLDLTFNQASVNAGYPGVAGEEEPDTYSKL
ESQRDSGSERSFRSQKSFDMVPLSQTFRTRSSQPKSNGSNSHRSNGSHGHSYSSSYAHSH
SSHGSGTHGGLSVRSSVSDMMSDGSESVGSVGSRNRGKGRLVTVGQAESEGNACPGREAL
EQIRSLGGQSDDESF
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggttcaagatagtgctcacattcggcggcgcagtgcccaggacttcatggcgtgctat
gactttgcctgtgccagacaggagtcggtccctctcacggctgttaggatgaacctcgac
aaagggatgctggacttcaatggagacagggtcaaactcccggactggccacccatcctc
agctccatctgcatcaacaaacacctgcaccacattgcaataagtagcacataccaaaca
agtctggcttctggagacacagatagaaggcactataagtctagcttcaggaagcggatc
ccagctattcgctctaaggacatgacatttaagttgtgcaaggccctgagagagtgtctg
actgtctcttccaacctcaagactctgcagctcaatgggcttccactcagagagagggac
ctcattaccttgacaaagggtttttcaaaaagtgtttccttggaaaacctatctctggct
aactgtccaatctctgatgagggcttagaggtcatctgccaaagtgtgaagtattctacg
agcatcaggacggtagattttacaggatgcaatctcacgtggagaggggcagagcatatg
gccaacatcatcaagcatcagggaatgcagaggcatggtaccgcatgggccgagtctctg
aggtatcggaagccacagtttgagggaatgggaggtctccggcgtgtcaccctgaactgt
aacactttgattggggaccggggtgctgctgctctagcgcatgaagtggcagaggacctg
tgggttaaagctttggacctacagaggtgcggcctgtccaacgagggagctcgtcgtctg
ctggaagccttgaaaacgaatactgctctttgcgtactggatattcgcagtaacccttta
attgacaaggtcctaattaaaaccgtcttagagagagtactgatgaatgctgacggacag
tcacccgagttctgctggatcaagcctgcagcctcggagccacagaaagcctccggtcca
aagaggcgagcactacccggcacagtcagaggaaagactacatttaggatagccgctcgt
aaaggaacatctcctgtgggacgtagttcaggcgatgctcagacccagaagcccttttcc
cactccggttatgtgccttggcgtgctgctgcacgagctgggcgtcagagaggtctgcct
cctggagattgtgtgatggatcaaagctttcagggggcagctaccgtgaaggtcactgtg
gagtcggactcggagggagaggaggacgaggaaggcgacgaagaagtggtggtggaaggg
gagaagggacccccttctcttggtctccaggacaggatcaccgggcggaagtttgaccac
atgcagatggagctaaaagagtgtcgtctgaggctggcagaggagcgcagggccagactg
aaagctgagtcgaggctcatggagcacgagttggagaatgcccgtcttcgtgacaccaac
ctctccctgtcggaggcgcttgcagccaccggctctgcatcggcaccgcccgctctcggt
gctcttgaagacgaagcggtcctcgagagcattgagagttcatttaccaagttccatgct
ttcctggatctcctcaaagatgctggccttggtcaactggcttcactggctggaatcgac
aagtccgatttccaccctcctggaaggcctcagctctcgtctacagtcggaccgtattct
gacggcgcggcgtcaccgactggaggggagcgccgggatgtccgggtaacggccgacgcg
tcgtcttcaatgagggtaggcggtgtgttggctgacaccatcactcccagacctccgtcc
tctgccagggagtttttacgtgaagacaggctcctagatttgaccttcaatcaggcctct
gtaaatgcaggataccctggtgttgctggagaagaggaacccgacacgtattcaaagctt
gaaagccagcgtgactcgggttcagagcgcagcttccgtagccaaaaatcctttgacatg
gttcccttaagtcaaacttttcggactcggtccagccagcccaagagcaacggcagcaac
tcgcacaggagcaacggctcccacggacacagctacagcagcagctacgctcacagtcat
tcctcccacggcagcgggactcatggggggttgtccgtaagatcgagcgttagcgacatg
atgagtgacgggtcagagtctgtggggtcggtggggtcaaggaacaggggaaagggaagg
ctagtgactgtcggtcaggcagagtcggaggggaacgcctgtcctgggagggaggctctg
gagcagattaggtctctgggtggtcagtcagatgatgagtccttctga
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