Cyclopterus lumpus (lumpfish): 117736700
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Entry
117736700 CDS
T09199
Symbol
pcna
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03030
DNA replication
clum03410
Base excision repair
clum03420
Nucleotide excision repair
clum03430
Mismatch repair
clum04110
Cell cycle
clum04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117736700 (pcna)
03410 Base excision repair
117736700 (pcna)
03420 Nucleotide excision repair
117736700 (pcna)
03430 Mismatch repair
117736700 (pcna)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clum03032
]
117736700 (pcna)
03400 DNA repair and recombination proteins [BR:
clum03400
]
117736700 (pcna)
DNA replication proteins [BR:
clum03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
117736700 (pcna)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
117736700 (pcna)
MMR (mismatch excision repair)
Other MMR factors
117736700 (pcna)
TLS (translesion DNA synthesis) factors
Other TLS factors
117736700 (pcna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
Herpes_UL42
Motif
Other DBs
NCBI-GeneID:
117736700
NCBI-ProteinID:
XP_034398098
Ensembl:
ENSCLMG00005017503
LinkDB
All DBs
Position
9:complement(22442625..22445615)
Genome browser
AA seq
260 aa
AA seq
DB search
MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRHDGFDSY
RCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLALVFETLNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSASGELGTGNV
KLSQTSNVDKEDEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYK
IADMGHVKYYLAPKIDEEAS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggctcgcctggtccagggctccatcctgaagaaggtgctggaggctctgaag
gacctgatcacagaagcctgctgggacgtcagctcgtccggcatctccctgcagagcatg
gactcgtctcacgtgtcgctggtccagctcacgctgcggcacgacggcttcgactcgtac
cgctgcgacaggaacctcgccatgggagtcaacctcagcagtatgtccaaaatcctgaag
tgtgcaggaaatgaagacatcatcaccctccgagcagaagacaatgcagacacactggcc
ctggtgtttgagacactcaaccaggagaaagtctccgattacgagatgaagttgatggac
ctggacgtggagcagctcggtattccagagcaggaatacagctgtgtggtaaagatgccc
tctggggagtttgcccgcatctgccgcgacctgtcccagatcggtgacgccgtcatgatc
tcctgtgccaaagacggagtcaagttctccgcctcgggagagctgggcacagggaacgtc
aagctgtcccagaccagcaacgtggacaaggaggacgaggcggtcactattgagatgaac
gaacccgtccagctgatctttgccctcaactatttgaacttcttcaccaaggcgacgccg
ctgtccaagacagtcaccctcagcatgtctgctgatatccccctcgtggtggagtacaag
atcgccgatatgggacacgtcaaatactacttggcacccaagatcgacgaagaagcttcc
taa
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integrated database retrieval system
