Cyclopterus lumpus (lumpfish): 117736712
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Entry
117736712 CDS
T09199
Symbol
apba1a
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1 isoform X1
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117736712 (apba1a)
Membrane trafficking [BR:
clum04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
117736712 (apba1a)
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
117736712 (apba1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
117736712
NCBI-ProteinID:
XP_034398118
LinkDB
All DBs
Position
9:complement(27068054..27108613)
Genome browser
AA seq
970 aa
AA seq
DB search
MNPQEMELGQEVMEEADAPPRLRHNNHSSRSRNHSNQEKRYRRFEAPAGENAVSRARVAQ
QRRPQEEQDAELQQGAQSPQPQQSQQPQQSIPRPAVTRYRRQGDSEARIRAQQQRHRQKQ
QREAEKAENLAQQQEKQRHAEMTQEDERERDDSVLARSASTESGFHTHTDRAEGDDGLVM
TTLEPEAQPEAEDETGNYGVQLRPEAEGYTESAEAEQQHLHLHPNYPQQPPPQPREPLPD
IPNPQRQDEAEEMLNTGYSNYVYTQPLSHSGGRADVSAGQSLESLDGALVDEAYAEPYDI
YSLSEHVYEEICNAPASVSSAADGTEDTEALRQRRAGFQLLEGRAGGGDYHQQEAVGSRL
RHYDERSDGESDSPEKEAEFAPYPGADSCDQEEDIDSIVAEVKESLSSQSLQHSLEDTID
EENKLQQGEEQPQQPESQTDSDQNNTSANPGKPARKQAASPSEELGAVRNSQEKRDAISL
AIKDIKEAIEEVKTRTVRSPYTPDEPKEPIWVMRQDLSPTAECDLQPSLGGDSPGSSSPS
PPGAESSSRHLLQDDSLESSPSSKETRRSLASFPTYVEVPGPCDPEDLIDGIIFAANYLG
STQLLSDKTPSKNIRMMQAQEAVSRIKTAQKLAQNRKKAPEGEPQPMTEVDLFISTQRIK
VLNADSQETMMDHPLRTISYIADIGNIVVLMARRRMPRPDSQESVEASDPGQESKRQYKM
ICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDLLNTQDMYNDDLIH
FSKSENCKDVFIEKAKGEILGVVIVESGWGSILPTVIIANMMHAGPAERSGRLNIGDQIM
SLNGTSLVGLPLSTCQSIIKGLKNQSGIKLNIVRCPPVTTVLIRRPDLRYQLGFSVQNGI
ICSLMRGGIAERGGVRVGHRIIEINSQSVVATPHEKIVHILSNAVGEIHMKTMPAAMYRL
LTAQEQPVYI
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgaacccccaggagatggagctcggccaggaggttatggaggaggccgatgcccctcct
cgcctccgccacaacaaccacagcagccggtcccgtaaccacagcaaccaggaaaagcgc
tacagacgctttgaagcacctgccggagaaaacgctgtcagcagagcgagagtggcccag
cagcgcaggccgcaggaggagcaagacgcggagctgcaacaaggagctcagtctccgcag
ccccagcagtcccagcagccccagcagtccattccccgacccgcggtgacacgttatcgc
cgacagggggacagcgaggcccggatcagagcccagcagcagaggcacagacaaaagcag
cagagggaggcggagaaagcagaaaacttggcacaacaacaggagaagcagcgccacgcg
gagatgacccaggaagacgaacgagagagggacgattcagtgctcgcccgctctgcgagc
accgagagcggcttccacacccacaccgaccgggccgagggggacgacggtctggtgatg
acgaccctggagcctgaggcgcagccagaagcggaagatgagacggggaactacggagtc
cagctacggccagaggcggagggatacactgagagtgccgaggctgaacagcaacacctc
catctacatcctaactaccctcagcagcccccgccacagccacgtgaacccctgcctgat
atcccaaacccccagagacaggatgaagcagaggagatgctgaacactggctattccaac
tacgtctacacccagcccctcagccactccggaggaagggccgatgtctccgctggtcag
agcttggagagtttagatggcgcccttgtagacgaagcctacgccgagccgtatgacatt
tactccctctctgagcacgtttacgaggaaatctgcaatgctcccgcatcagtttcatct
gctgcagacgggacagaggacacagaggcgctccgacagaggcgtgccggctttcagctg
ttggaaggccgggcgggaggcggggactaccatcagcaggaagcggtgggctcccgtctg
cgccactacgacgaacgctcggatggagagtcagacagcccagagaaggaggcagagttt
gccccatacccaggcgccgacagctgcgaccaggaagaggacatcgatagcatcgtggct
gaggtcaaagaaagcctgagctctcagagtcttcaacattctttggaggacaccatagat
gaagagaacaagcttcagcagggtgaggaacaaccccaacaacctgagtcccaaaccgac
tcggaccaaaacaacacatctgccaacccagggaagccagccaggaaacaggctgcgagt
ccctcagaggagctgggagcagtgaggaacagtcaagagaagagggacgcaatatccctg
gccattaaggacattaaggaggccatagaggaggtaaagaccagaacggtgagatctcca
tacacgcctgatgagcccaaggaacccatttgggtaatgaggcaggacctgagccccact
gcagagtgtgacctacagccatcactggggggtgattcccccggttcaagctcgccctcc
cctccaggagcagagtcgtccagcagacatctgctgcaggacgacagcctggaatcttcc
ccctccagtaaagagaccaggagaagcctcgcgtccttccccacatatgtagaagtcccc
ggcccatgtgacccggaggacctgatcgatgggatcatcttcgcagccaactacctgggc
tccacccagctgctgtcggataagactccgtccaagaacatccgcatgatgcaggcgcag
gaggccgtcagccgcatcaagacggcccagaaattagcccagaacaggaagaaggcccct
gagggagagcctcagcccatgacggaggtggatctcttcatctccacccagaggatcaaa
gtgctcaacgccgactcccaggagaccatgatggaccaccctttgcggaccatctcctac
attgccgacattggcaacatcgtggtcctgatggcccggcgccggatgcctcgccccgac
tctcaggagagcgtggaggcctcagacccgggtcaagagagcaagcgccagtacaagatg
atatgccacgtgtttgagtctgaggatgcccagttgattgcccagtccatcgggcaggcc
ttcagcgtggcctaccaggaattcttaagggccaatggcattaaccccgaggacctgagc
cagaaggagtacagtgacttgctcaacactcaggacatgtacaatgatgacctcatccac
ttctccaagtcggagaactgcaaagacgtgttcatagagaaagctaagggggagattctg
ggtgtggtcattgtggagagtgggtggggctccatcctgcccactgtcatcatcgccaac
atgatgcacgccgggccagctgagaggtccggcagactgaacataggagaccagatcatg
tcccttaatgggaccagtctggtgggactgccactgtccacctgccagagcatcatcaag
gggctgaagaaccagtccgggatcaagctaaacattgtcagatgccccccagtgaccact
gtactcatccgacggccagacctccgctaccagctgggcttcagcgtccagaatggcatt
atctgtagccttatgcgcgggggcatcgccgagcggggcggggtccgagtgggtcaccgc
atcatcgagatcaacagccagagcgtggtggccacgccccatgaaaagattgtccacatc
ctgtccaacgccgtgggagagatccacatgaagacgatgcccgcagccatgtaccgcctg
ctgaccgcccaggagcagcccgtttacatttaa
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