Cyclopterus lumpus (lumpfish): 117736773
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Entry
117736773 CDS
T09199
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
clum04054
]
117736773
Pattern recognition receptors [BR:
clum04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117736773
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
NOD2_WH
PRY
LRR_1
LRR_4
SPRY
Motif
Other DBs
NCBI-GeneID:
117736773
NCBI-ProteinID:
XP_034398210
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All DBs
Position
9:6748838..6758499
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AA seq
1240 aa
AA seq
DB search
MSQCEDREEGVPPSKTTLCGEHDSRTKAQRIHQRPDCPEPEPEPGPEPGPSCVSMKSDWS
MDRPINLKDGRHPVDQSSQREKSPEPSCVSLKRYRSKDDVNNFGDARDSYDPEEDQESSE
VRRGVFSQQHQTHLDSIFMLLEENILTFVKNELKKIQKVVSSDYPECFDSQREDEEGLDG
EDEEQRRSSREAFLKISLHFLRRIKQEELADCLQNRLLAAVCQRELKCNLKKKFQCVFEG
TSKSGNPTPLNQIFTELYITEGGTAEVNKDHEVRQIEIASRKPHRPETTIRQEDLFKASS
GREEPIRTVMTRGVAGIGKTVLTQKFTLDWAEDKANQDIQFTFPFTFRELNVLKEKKFSL
VQLVNHFYTETKEAGICRFEEFPVVFIFDGLDECRLPLDFHNNEVLTDVTESTSVDVLLT
NLIKGKLLPSARLWITTRPAAANQIPLDCVDLVTEVRGFTDPQKEDYFTKKFREEQVSRI
ISHIKASRSLHIMCHIPVFCWITATVLEDVLNTTEGGKLPKTLTEMYIHFLVVQSKVKKV
KFYGGAETDPHWNPKSRKMTKSLGKLAFDQLQKGNLIFYESDLAECGIDIRTASVYSGVL
TQIFREERGLYQDQVFCFVHLSVQEFLAALHVHLTSINSGVNLMSEEQKTSLLSKVFRDN
PKPRHLYPSAVDKALQSPNGHLDLFLRFLLGLSLETNQTLLRGLLTQTGSSPQTNQRTVQ
YIKKKISENVSPEKSINLFHCLNELNDGSLVEEIQQSLRSGGLSTDELSPAQWSALVFIL
LSSEEDLEVFDLKKYSASEEALLRLLPVVKASNKALLSGCNLSERSCEALSSVLSSKSSS
LRELDLSNNNLRDSGLKLLSAGLESPHGRLETLRLSGCNLSERSCEALSSVLSSKSSSLR
ELDLSNNNLRDSGLKLLSAGLESPHWRLETLRLSGCNLSERSCEALSSVLSSQSSSLREL
DLSNNDLRDSGLKLLSAGLESPHWRLETLRLSGCLITEEGFASLASALSSNPSHLRELDL
SYNHPGDSGVKLLSAGLEDPQWRLETLRVEPAGVRWFTPGLRKYSCELKLDTNTVNRKLK
LSDSNREVTGVREDQSYPDHPDRFDYWPQLLCTTGLTGRCYWEVEWRGDVYISVSYRGIS
RRGASEDCWFGRNDQSWSLICSDGGYSVCHNKTVTSSSSSSSSGRVAVYVDCPAGSLSFY
RVSSDKLIHLHTFNTTFTEPLYPGLGVWSWSGSSLSLCSL
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtgtgaggacagagaggagggagtcccgccctctaaaaccactctgtgtggg
gaacatgacagccggaccaaagctcagaggatccatcagagaccagactgtcctgaacct
gaacctgaacctggacctgaacctggacccagctgtgtgtccatgaagagtgactggtct
atggatcgtcctataaacctcaaagatggacgccaccctgttgatcaaagttcacagaga
gaaaagtctcctgaacccagctgtgtgtccttgaagaggtatcggtctaaagacgatgtg
aataacttcggagatgcacgagattcttatgacccagaagaggaccaggagagctcagag
gttcgcagaggtgtgttttcccagcagcatcaaacacacctggactccatatttatgctg
ctggaggagaacatcctcacttttgtgaagaacgagctgaagaagatccagaaggttgtg
agttcagattacccagaatgctttgacagtcagagggaggatgaggaggggctggacggt
gaggatgaagagcagaggaggagcagcagagaagcatttctgaagatctcactgcacttc
ctgaggaggataaagcaggaggagctggctgactgtctgcagaacagacttcttgctgca
gtttgtcagcgtgaactcaaatgtaacctgaagaagaagttccagtgtgtgtttgagggg
acctctaaatcaggaaacccaacccccctgaaccagatcttcacagagctctacatcaca
gagggagggactgcagaggtcaataaggaccatgaggtcagacagattgaaatagcatcc
aggaaaccacacagaccagaaaccaccatcagacaagaagacctcttcaaagcctcgtct
ggaagggaggaaccaatcagaacagtgatgacaaggggagtggctggcattgggaaaaca
gtcttaacacagaagttcactctggactgggctgaagacaaagccaaccaggacatccag
ttcacgtttccattcacgttcagagagctgaatgtgctgaaagagaagaagttcagcttg
gtgcaacttgttaatcacttctacacagaaaccaaagaagcaggaatctgcaggtttgaa
gagttcccggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttc
cacaacaatgaggtcctgactgatgttacagagtccacctcagtggatgtgctgctgaca
aacctcatcaaggggaaactgcttccctctgctcggctctggataaccacacgacctgca
gcagccaatcagatccctctggactgtgttgacttggtcacagaggtcagagggttcact
gacccacagaaggaggactacttcacaaagaagttcagagaggaacaggtcagcaggatc
atctcccacatcaaggcctcccgaagcctccacatcatgtgccacatcccagtgttctgc
tggatcactgctacagttctggaggacgtgttgaataccacagagggaggaaagctgccc
aagaccctgaccgagatgtacatccacttcctggtggttcagtccaaagtgaagaaggtc
aagttttatggaggagctgaaacggatccacactggaatccaaagagcaggaagatgacg
aagtctctgggaaaactggcttttgatcagctgcagaaagggaacctgatattctatgaa
tccgacctggcagagtgtggcatcgatatcagaacagcctcagtatactcaggagtgtta
acacagatcttcagagaggagagaggactgtaccaggaccaggtgttctgcttcgtccat
ctgagtgttcaggagtttctggctgctcttcatgtccatctgacctccatcaactctggt
gtcaacctgatgtcagaagaacaaaaaacctccctgttgtctaaagtatttagagacaac
cctaaaccaagacatctctacccgagtgctgtggacaaggccttacagagtccaaatgga
cacctggacttgttcctccgcttcctcctgggtctttcactggagaccaatcagactctc
ctacgaggtctgctgacacagacaggaagtagcccacagaccaatcagagaacagtccag
tacatcaagaagaagatcagtgagaatgtgtctccagagaaaagcatcaatctgttccac
tgtctgaatgaactgaatgatggttctctggtggaggagatccaacagtccctgagatca
ggaggtctctccaccgatgaactgtctcctgctcagtggtcggctctggtcttcatctta
ctgtcatcagaagaagatctggaggtgtttgacctgaagaaatactctgcttcagaggag
gctcttctcaggctgctgccagtggtcaaagcctccaacaaagctctactgagtggctgt
aacctatcagagagaagctgtgaagctctgtcctcagtcctcagctccaagtcctctagt
ctgagagagctggacctgagtaacaacaacctgcgggattcaggactgaagctgctgtct
gctggactggagagtccacacgggagactggaaactctcagactgagtggctgtaaccta
tcagagagaagctgtgaagctctgtcctcagtcctcagctccaagtcctctagtctgaga
gagctggacctgagtaacaacaacctgcgggattcaggactgaagctgctgtctgctgga
ctggagagtccacactggagactggaaactctcagactgagtggctgtaacctatcagag
agaagctgtgaagctctgtcctcagtcctcagctcccagtcctctagtctgagagagctg
gacctgagtaacaacgacctgcgggattcaggactgaagctgctgtctgctggactggag
agtccacactggagactggaaactctcaggctgtcaggctgtctgatcacggaggaaggc
tttgcttctctggcctcagctctgagctccaatccctcccatctgagagagctggacctg
agctacaatcatccaggagactcgggggtgaagctgctgtctgctggactggaggatcca
caatggagactggaaactctcagggtggagcctgctggagtccgatggttcacaccaggt
ctgaggaagtattcctgtgaactcaaactcgacacaaacacagtaaacagaaagctcaaa
ctgtctgacagcaaccgggaggtgacaggtgtgagagaggatcagtcatatcctgatcac
ccagacaggtttgactactggcctcagctgctgtgtacaactggtctgactggtcgctgt
tactgggaggtcgagtggagaggagacgtttatatatcagtgagttacagaggaatcagt
aggagaggggccagtgaagactgttggtttggaaggaatgatcagtcctggagtctgata
tgctccgatggtggttactccgtctgtcacaataagaccgtaacatcctcctcctcctcc
tcctcctccggtagagtagcagtgtatgtggactgtcctgctggctctctgtccttctac
agagtctcttctgacaaactgatccacctccacaccttcaacaccacattcactgaacct
ctttatcctgggttgggggtctggtcctggtctggttcctcattgtctctgtgttctctg
tag
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