Cyclopterus lumpus (lumpfish): 117736813
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Entry
117736813 CDS
T09199
Symbol
sorcs3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117736813 (sorcs3)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Others
Others
117736813 (sorcs3)
Endosome - Lysosome transport
117736813 (sorcs3)
Endosome - Golgi transport
117736813 (sorcs3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
117736813
NCBI-ProteinID:
XP_034398284
Ensembl:
ENSCLMG00005019770
LinkDB
All DBs
Position
1:complement(2291776..2487881)
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AA seq
1240 aa
AA seq
DB search
METWAGFCPGLHLSLGIWVVIAAQTLHNAKAEITCASCASPVQLHVGELELGMSTDPKEE
PGTLKNIRIEFRELADTDQNTGVDADHETGVSVEDVPRFPQHVSLVGVGAKEDASGSSEL
SHRGSERAGEPEKSEGAALRRAKRSGPEFSEFSENGRTGRTDMDAAAPEDRGSLFEGHKQ
GRSEFRWNRDEARGNNRQDEPKLTSSTFSLAGDSAHNHAVVYWSGQNSSVILILTKLYDF
HIGSVTESTLWRSTDYGSTYERMNDRVGTKTVLSYLYVCPTNKRKIMVLTDPEFESSVLI
SSDEGASYQKYRLTFYVLSLLFHHTEEDWALAYSHDQKLYSSVDFGRKWQIIHERVTPNR
FYWSVSGLDKEPDLVHMEAHTPDGNVQYVTCRAPMCTEANRNYPFPGYIDISSLVVQDDY
IFIQVPTSGRATYYVSYTRDSFIQIKLPKYSLPKDLHIVSTDEKQVFAAVQEWNQNDTYN
LYLSDTRGIYFTLAMENVKTTRGIGGNQMLDLYEVAGIKGMLIANKRQDNQVKTYMTYNK
GREWRLLQAPATDLDGNDIHCILPFCSLHLQLQMSENPYLSGTISTKNSAPGIIVATGNI
GAELSYNNVGMFISSDAGNSWRQIFEEEHNVWFLDKGGAIVAVKQPSVPTRHLWVSFDEG
RQWTQHSFSLVPLFVDGVLVEAGAENQIMTFFGHFSHRSEWQLIKIDYKSIFSRKCTEED
YQTWHLHNQGEPCVMGQKQIYMKRRPGNYCMLGKDYSRILSAESCICRAHDFECDYGYER
RGDGNCRPAFWFNPSTVSRSCSQGQNYLNSTGYRKVVLNNCTKGVKEMYMARKQQCPNRP
PKGLQLTSKDGKLTANLGSNVTFLVHLDEGDSLRTNIQLDFGDGTAVSYSNLSWTEEGIK
HLYKSAGIFRVTALAENTLGYDSTTLFLHVTCPVEHVRLLAPFVVIKNKEVNITAVVLPS
HSRTVTFFWWLDNNTEPVITLDGSISHTFPDDGMHTVTVQVAAANAILQDTRTIAVKEFF
KSLLLSFSPNLDEFNPDIPEWRQDVGRVIKKALLQVSDFPEEQLLVAVFPGVPTAAELFL
LPHKNQSEGKKKSEEVLEQVSDIIVSALNQNLVEFELKPGVRVIVYNTQLTLAPLVDSNP
RHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNQEKEQEMIGSVGQGDSTPKI
TLSEFPTSKELMEKELDARVKRGVGNACESTREIPNCTSV
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggagacttgggctggcttttgcccaggcttgcacttatctctgggtatctgggtggtg
atagccgctcaaaccctacacaatgccaaggcggagataacttgcgcatcttgtgcgtcg
ccagttcaacttcacgtgggagaattggagctgggtatgagcactgacccgaaagaggag
ccgggcaccctaaaaaacatccggatagagtttcgggaactcgcggataccgaccaaaat
actggagtggacgccgaccatgagacaggcgtttctgtggaggatgtgccccggttccct
caacacgtcagtttagttggagttggcgcaaaggaagacgcatcggggtccagtgaatta
agtcaccgcggcagtgagagggcaggggagcccgagaagagtgagggtgctgcccttcga
agagcgaagagaagcggtccggagttctccgagttcagcgagaacgggcggaccggccgg
accgacatggatgcggctgctccggaggatcggggctccttgtttgaaggacacaagcag
ggcaggtccgagttcagatggaacagggatgaagcgagagggaataaccggcaggatgag
cccaagctgaccagcagcactttctctctggcaggggactctgcgcataaccacgcggtg
gtttactggtcaggacagaacagcagcgtgatcctgatcctcaccaagctgtatgacttt
catattggcagcgtcactgagagcactctttggagatccaccgactacggctccacatac
gagagaatgaacgaccgggtcggaaccaagaccgtcctgagttacctgtacgtctgtccc
acgaacaagagaaagatcatggtgttgacggatccagagtttgagagcagtgtgctcatc
agctccgatgagggagccagttaccagaagtaccgcctcactttctacgtcctgagcctc
ttgttccaccacacagaagaggattgggccttagcctacagtcacgaccagaagttgtac
agctctgtggactttggaagaaaatggcaaatcattcacgaacgtgtcacaccaaacaga
ttctactggtctgtctccggcctcgacaaggagccagatctggtgcacatggaggctcat
acaccagatggaaacgtgcagtatgtcacatgcagagctccaatgtgcacagaagctaac
aggaactacccgttccccggatacatcgacatcagctctttggtggttcaagatgactac
atattcatacaggttcctacatcaggacgagccacctattacgtgtcctacaccagagac
tcttttatacaaatcaaactacccaaatattccctgcctaaggatttacacatcgtcagc
accgatgagaagcaggtgtttgcggcggtgcaggaatggaaccagaacgacacctacaac
ctctacttgtctgacaccagagggatctacttcaccttggccatggaaaatgtcaagacc
acgaggggcatcggagggaaccagatgctggatctgtacgaggtggcaggaatcaaaggc
atgttgattgctaacaagaggcaagacaaccaggtcaagacctacatgacctacaataaa
ggccgggagtggaggctcctgcaggctcctgcgaccgacctggatggaaacgacatccac
tgcatactgcccttctgttcacttcatctccaactgcagatgtctgagaacccttacttg
tcaggaacaatctccaccaagaactctgcaccagggatcatcgtggccacggggaatatt
ggagcggagctgtcttacaacaacgttggcatgttcatatcatctgatgccggcaatagc
tggagacagatttttgaggaggagcacaacgtgtggttcctggacaaaggaggggccatc
gttgctgtcaaacagccgtcggtgccaaccagacacttgtgggtcagcttcgatgagggg
aggcagtggacccagcacagcttctccctggtgcctctgttcgtggatggggtcttggtg
gaggctggggctgagaaccaaatcatgaccttctttggacacttcagccatcgttctgaa
tggcagctcatcaagatcgactacaagtccatttttagcaggaaatgcacagaagaagac
tatcagacctggcacctgcacaaccagggtgagccatgtgtgatggggcaaaaacagatt
tacatgaagcgcaggccggggaactactgcatgctgggaaaggactactccagaatcctt
tcagctgagtcctgtatttgtcgagctcatgattttgaatgcgattacggatatgagcgt
cgcggcgacgggaactgccggccagccttctggttcaacccctccaccgtctccagaagc
tgcagccagggtcaaaactacctcaacagcacagggtaccgcaaagtggtgttaaacaac
tgcactaaaggagttaaagaaatgtacatggccagaaagcagcagtgccccaacagacct
ccaaaaggactccagctgaccagcaaagacggaaaactcacggccaacctgggcagcaac
gtcaccttcttggttcatctggatgagggcgactctctgcgcaccaacatccagctggat
ttcggcgatggcacagccgtgtcctactccaacctgagctggaccgaggagggcatcaaa
cacctctacaagtcggctggaatattccgtgttacagctctggcagagaacacgctcggt
tacgattccaccacactcttcctgcacgtcacatgcccagtggagcacgtccggcttctc
gctcccttcgtggtcataaagaacaaagaggtgaacatcacagcagtggtcctacccagc
cactcacgcactgttaccttcttctggtggctcgacaacaatactgagcccgtgataacc
ttggacgggagcatctcacacaccttccccgacgacggaatgcacaccgtcactgtccaa
gtggctgcagccaacgccatactgcaggacaccaggaccatagcagtcaaagaattcttc
aaatctctacttttatccttctccccgaatctggacgagttcaaccccgacatacccgag
tggagacaggatgtggggagagtaattaagaaggctttgctccaagtgtctgacttccca
gaggagcagcttctggtcgccgtgttccccggcgttccaacagctgccgagctcttcctg
ttaccgcacaagaaccaatcagagggcaagaaaaagagcgaggaggtgctggagcaggta
tccgatataatcgtgagcgcgctgaaccaaaatctggtagagttcgagctcaagccgggc
gtgagggtgattgtgtacaacacacagttaacactggcaccgttggtggactccaacccc
agacacagcagctccgccatgctgatgctcctctcagtggtgttcctgggcctagcagtg
ttcctcatctacaaattcaagagaaaaataccttggatcaacatctacgctgaggtgaac
caggagaaggagcaggagatgatcggctcggtgggccagggcgacagcacgcctaaaatc
actctgagtgagttccccacatccaaagagctcatggagaaagaactggatgccagggtc
aaacgaggagttggaaatgcctgcgagagcacgagggagattccaaactgtacgagcgtg
tga
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