Cyclopterus lumpus (lumpfish): 117736818
Help
Entry
117736818 CDS
T09199
Symbol
arid5a
Name
(RefSeq) AT-rich interactive domain-containing protein 5A
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117736818 (arid5a)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
ARID
117736818 (arid5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Radial_spoke
Meckelin
CENP-B_dimeris
PA26
Motif
Other DBs
NCBI-GeneID:
117736818
NCBI-ProteinID:
XP_034398286
LinkDB
All DBs
Position
9:12911569..12918254
Genome browser
AA seq
632 aa
AA seq
DB search
MAPRELLSQNAVKPETRRQLLEMAREEQSGTSQQTSASDEHQGTENQVSVNEILYNSMTE
CEEEEEEEEEEEEEEEEEEEEEEEEARPKLVQMEEKAFISSLHSFMKDRGTPIERIPHLG
FKQINIWRIYKAVDKLGGYDSVTARRLWKKVYDELGGSPGSTSAATCTRRHYEKLVLPFE
RQIKGEEDRPLPLSKPRKPYKRNLDSKVTKAERKRKRTQSDREMDSEIEILTERSPEAAC
QSEAVMHPHPWAATSDGHRSDCSLPSRATTGLCKSVSAHLVQVPTSWAAHIPSAAGEVIS
PLEKKKRMAQASLNLPLNPHTEDKERPSVIHCSQSPARASSSRNCECSDSSPPASSPSSS
RSPSPYSVSSEDGPERNEDYSALGSQLSQNCTSAVKNIPSCSEERKCSQISKDPAGQNKD
ISSQSTDSIKVQNKDSDWKPIHKGRGKYSSQPFQSFSSSDWASTSTSGFTKVIPKSVQLL
RPAPIRPGYKAQQGRLMQQDESLTCAKRLNNMTPWLYQTEKREKSRTMQQKVPPTQHSLA
HSTASLPVSCVLSSYDKSGRYSRHQPLLHPAFLPNRMRLPQSQLIYRHVPMSPVHSTLMG
SVVYPYPYSIPLLNPQNGYALPAMHPFYPHKL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcgtgaattactgtcacaaaacgccgtcaagccagaaactagaaggcaactt
ctggaaatggctcgggaggagcagagtggcacttcacaacaaacatcagccagtgacgaa
caccaggggacagagaaccaggtttctgtcaatgagatcctctataactctatgactgaa
tgtgaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagcgaggcccaagctagtgcaaatggaggagaaggcatttatatca
agtctgcactcttttatgaaggacagaggtacacctatagaaaggatcccacatctgggc
ttcaaacagattaatatttggaggatctacaaagctgttgacaaacttgggggctatgat
tcagtgacagcacggcgtctttggaagaaggtgtatgatgagctgggaggaagtccaggt
agcaccagcgctgctacttgcactcgaagacactatgagaaactggtgctgccctttgaa
agacaaataaaaggagaggaggaccgacctctgcctctaagcaaaccacggaagccatat
aagagaaatttggatagcaaggtcaccaaggctgagagaaagaggaaaaggactcagtcg
gatagagagatggactcagagatagagatactcaccgaaagaagtccagaggcagcttgc
caaagtgaagcagtgatgcatcctcacccctgggccgccacctctgatggacaccgctca
gactgttctttgccaagccgagccaccaccggtctttgcaaatctgtctctgcccacctt
gtccaggtccccacatcctgggctgctcatatcccgtctgctgccggagaggtcatctct
cctctggagaaaaaaaagcggatggctcaggcgagcctgaacttgccactgaatcctcac
actgaggataaagaaaggccctccgtcattcactgctcccagtctccggcccgggcttct
tccagccggaactgcgaatgctccgacagctcgccgcctgcttcatccccatcctcttca
cgcagcccttccccttactctgtttcatcagaggatggcccagaaagaaatgaagattat
tctgcattaggctctcaactttcccaaaactgtactagcgctgtgaaaaatatcccaagc
tgtagtgaagaaaggaagtgtagtcagatatccaaagaccctgcaggacagaataaagac
atcagctcccaatccacagactccattaaagtccagaataaagactctgactggaagcca
attcacaaagggagaggcaaatattccagccaacctttccagtcattctcctcttcggat
tgggcttcaacatctacctctggtttcaccaaagttattccaaaatctgtgcagcttctg
cggcccgctcctattcgtccaggttataaagcccagcagggcaggttgatgcagcaggac
gagtctctgacttgtgcgaagaggctgaacaacatgactccctggctttatcagacagag
aagagggagaaatccaggactatgcaacagaaggttccccccactcagcatagtctggcc
cattccaccgccagtctgccggtgtcgtgtgtcctgtcgagctacgacaaatcagggaga
tactctcgacaccagcctctattacatcctgcttttctccccaaccgaatgagactacct
caatctcaactaatataccgacacgtcccgatgagtccagttcactctactctcatgggg
tctgttgtttacccatatccctactccattcctctgttaaatccccaaaatggatatgcc
ctacctgctatgcatcccttttaccctcacaagctgtga
DBGET
integrated database retrieval system
