Cyclopterus lumpus (lumpfish): 117736947
Help
Entry
117736947 CDS
T09199
Symbol
cldn5a
Name
(RefSeq) claudin 5a
KO
K06087
claudin
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03272
Virion - Hepatitis viruses
clum04382
Cornified envelope formation
clum04514
Cell adhesion molecules
clum04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117736947 (cldn5a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117736947 (cldn5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117736947 (cldn5a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117736947 (cldn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
clum03037
]
117736947 (cldn5a)
04147 Exosome [BR:
clum04147
]
117736947 (cldn5a)
Cilium and associated proteins [BR:
clum03037
]
Other cilia and associated proteins
Stereociliary proteins
117736947 (cldn5a)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
117736947 (cldn5a)
Exosomal proteins of colorectal cancer cells
117736947 (cldn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF1129
MFS_MOT1
Motif
Other DBs
NCBI-GeneID:
117736947
NCBI-ProteinID:
XP_034398511
Ensembl:
ENSCLMG00005016848
LinkDB
All DBs
Position
9:22267488..22269282
Genome browser
AA seq
215 aa
AA seq
DB search
MVSAGLEILGLSLCVLGSLLVMVSCGLPMWKVTAFIEANIVVAQTIWDGLWMSCVVQSTG
QMQCKVHDSVLALSHDLQAARALTIISSVMGVLGLMVVIAGAQCTNCIRAEYVKARVVNA
GGVVYIVSGLFVLVPLCWMANSIISDFYNPQVPPSKKREIGAALYIGWAATALLLVGGGM
LCCSCPSSGNSGYSVKYAPTKRATPNGEYDKRNYV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggccggactggagatcttgggactgtcgctgtgcgtactcggctcgctcctg
gtgatggtttcgtgtgggctgcccatgtggaaggtgacggctttcatcgaggccaacatc
gtggtggctcagacgatctgggacggcttgtggatgtcgtgcgtggtgcagagcacagga
cagatgcagtgcaaggtgcacgactccgtcctcgcactcagccacgacctccaggcggcc
agggcgctcaccatcatctcctcggtgatgggcgtcctggggctcatggtggtgatcgcg
ggggcgcagtgcaccaactgcatccgcgccgagtacgtcaaagcccgggtggtgaacgcc
ggaggggtcgtctacatcgtcagcggtctgtttgtgctggtgcctctctgctggatggcc
aacagcatcatatccgacttctacaacccgcaggtgcccccgtccaagaagagggagatc
ggcgccgcgctctacatcggctgggcggccacggcgctgctgctggtcgggggagggatg
ctgtgctgctcctgtccctccagcgggaactccggatactctgtaaaatacgcaccgacc
aagagagccacgccgaacggggagtatgacaagaggaattatgtgtag
DBGET
integrated database retrieval system