Cyclopterus lumpus (lumpfish): 117736950 Help Entry 117736950         CDS       T09199                                  Name (RefSeq) dmX-like protein 1 isoform X1   KO K24155   rabconnectin-3a Organism clum  Cyclopterus lumpus (lumpfish) Pathway clum04142   Lysosome Brite KEGG Orthology (KO) [BR:clum00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     117736950  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:clum04131]     117736950 Membrane trafficking [BR:clum04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     117736950  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     117736950    RAVE complex     117736950 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd EIF3I Beta-prop_HPS5 Beta-prop_WDR75_1st PEP5_VPS11_N Beta-prop_EML NBCH_WD40 Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_IP5PC_F Beta-prop_WDR19_2nd Beta-prop_SPT8 SSTK-IP Beta-prop_DCAF12 Motif Other DBs NCBI-GeneID:  117736950 NCBI-ProteinID:  XP_034398518 Ensembl:  ENSCLMG00005007828 LinkDB All DBs Position 9:23133779..23181992 Genome browser AA seq 3106 aa AA seqDB search MNLHQVLTGAVNPGDNCFSVGSVNNVPFTAYASGCDVVILGSDFERLQIIPGAKHGNIQV CCVDCSLQGGQIAASYGSIVCVFEPVQHPDQKDTTLTKLNCQWQKTGQFVLQSMVRNLAW HPTGCMLLTGSSSLQLWSNVTGVKDEAEEVGTQTEMTIGETHSAWRCIWQSKMASQVSLM KFSPDGEFFATAGQDDCLVKVWYNTGKWKLGVSRLFTPPEPSECFQGELAFSFVYLAHPR SVTGFSWRKTSKYMPRGAVCNVLLTCCKDSVCRLWAETLLPGDGLLSGCHNNHAFGQRGD TPGCAGPSSTTCNGKLPGRTAQELNFQRYLLGSFHRDVPQPSLTSGLPHHQSRHYSHRRS SSNMPHANALCHFHIAASINPATDIPLLPSISSLSSVDDEEPGGLFTVHWLNNKELHFTL AMDVFLQQLRGSLEPQDNGSHEVPEDEDNFDEEDDSSRPSDSQGPESAELPLAAVKHQVD VLLEEWNKGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQAQVSFVSRIPVAFPTGDAI SLSHGVVMYACNKNVDLAIQHGRKRPPGSALPQTKSALISYGGQGKAAPSSSLRLSIFTP NVLMISKHADGSLNQWAVGFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTT SHHNALRTPEADGILAPPDAYSCGFSHPAFLPRGARPSRVSLGAVSQDPNAIYSELILWR VDPVGPLSLSGGVSELARINSLHASAFAQVAWLPTFIPSSCLGVYCNSPSACFVASDGHS LRLYQAVIEAKKLLSELSNPEISKYVGEVFNIISQQSTAKPGCIIELDTITDFQGKETQL LHVFEEDLILGSERTESTQQTPDSPHTASSKAAFSARFFLVVVELTPTGRSLLHMWHLHL AARPITMEETMKETDVTSASPMNSSTFSFDAFSSPVGQKSKPCTSNLQSACRLSLTTHRL YSQEMALPEGVEAISVTPSAGHLSASCSLPADRVPYLLATSCSDGKVRFWRCIVIATGPS SMDSLVYQWEEWPLLVEERLPNSSAVTVQGRPIEVSCCHSGLIAVAYKQIPTTPFISTPY LNPLQLLTSPPTLSSSPYVHNNNTHPTPTLTVQHSPNLSLSPNAANTREPLVHIGIFQCE STGGSQWHLEQTIVLDSTDPTTGSTNIPGNMDLTVHNEDCPGSTFKSLVHLDWVSQEDGS HVLTVGIGTKIYMYGRLSGKPPELGLTSDASRDRSSSLVLIQSVDLVSSVEGSLPIPVSL SWVRDGILVVGMDCEMHVYSQWQPPAPIKPNAQIAQDTDISSSDSSIISAIRQSQEDGPS SGAPMSSLAPPKKSLTRSMMSLAQKLSGKRTAYDLPVEMEDSGLFEAAHQLFPTLPQYHP VQLLELMDLGKVHRAKAILSHLVKCIAGEIVALKDSTTNPEKRVRSRTISAGGSTARDRK MFSKAENATPDYTEISSIPPLPLYALLAADEDTSPKPDKVSSVSGDSGHGSIHTDVYDEL FHTPTVADLDPLEDDQEETGNKVIDLSQYSPTHFGPEHAQVLSSHLLHSSLPGLTRMEQM SLMALADTIATTSTDLKDSQGTSKGGETLDECGLKFLLAVRLHTFLSTSLPPAHRAQLLR QGLSTCHYAWAFHSEAEEELLNMLPALQKGEPTWPELRSMGVGWWLRSSNKLRRCIEKVA KTSLQRNNDPLDAAIFYLAMKKKAVVWGLYRSQKNAKMTEFFRNNFSEDRWRKAALKNAF ALLGKQRFRHSAAFFLLAGSLKDAVEVCLEKMQDLQLALVISRLYESEFEMASTYKKILQ RHVLGQDKQIQAHQDPFLRSMAHWVLEDYSRALDTLLEQPANDISSGSTESKCDAGSSSV STCNPEVFNFYTYLRTHPLLLRRHFGSLDKAKVGLTAEGRRPDSISLEERRLFFTAAYAH LQAGCPMLALEVLSKMPKVRKHSKLPNQADTGTAAELSVGSKNGRTSNPDWSQPALNGYE SDGQSLSNSQSDSVLSFDWSQQSLAHTDEPLELKWDSDKDEEDEEEESKNVFSSSVFQDT QDAISPQMETLTGEDGENCNDFLAPSNDILAAQLKFTACLKIMTNELRTLSNGYQLDGGK LRCQLYQWLEREVVALQRCCSYKPCLPELSVQGDAPVSGLVEEEQPGSPHGHSQRSRRHW LQSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESHQDDSTQPAVMPCCPPTSIPL LMACTANVKTVVANPIVYLTNLAHDILWTINSLDSPPHPDVANNEIYVMHTLAASLSACI YQCLCDGHTHSHVNQFTGIVYQSVLLSQKQPLRTVSMDESVQPNTSPAQWPGIASLIRLL SSAGEESQPGLTVLLCEILTAVFLSLFVHGMATHSSNELFRIVAHPLNSKLWVAVFGGGA RTPVIEKLNSPTRTPPPASPSGSDRKSRRFRLLSSRSGSREEAGNERERPSSPKRGPVVE QEAASIFKERFVPPELSIWDYFIAKPSLPPSEDRIEYDSEESQDSQDDEEEDDAEYEDVF DPSSPQREHSNHNSYSWCLMRLAMVQLVLVNLKSFYPMAGYDLLDLPVGSPLCHAVLKTL QRWEQVLQKRLEIFGGPPSMYISTLLKDETAAPGPALLRHKALFEPSNTPFRTSHHSALP VKRLWQFLVKQEEVQETFIRNIFTKKLDPNESCEDQADNMKCSGMEETGNTQTESDLGST GGKARIIHKESDIITAFAINKANRNCLVMASTHDIQELDVSSILATQILTWIDDDDAEVK GVGSDDFLVVHARDDFAALHGTTPYTHSSPGTPINMPWLGGVQTGRGAAVVSSRPGVMIK RNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRFNHQGNK FGIVDADGGLSLWQTNTSGIAPKPYLTLQCHNKTAHDFVFVGSSSLIATAGLSTDNRNVC LWDTLVTPANSLVHAFCCHESGATVLLMASRQQLLITGGRKGWISILELAHRHQRQSFQA HDSPVKALAVDPTEDCFISGSAEGNIKIWSLATQCALYTFPNEHARQSLFRNLGTGVMQI EVGPTNHIFSCGADGTMKMRVLPNRFSVNNNNNNHGNLKNDVKFII NT seq 9321 nt NT seq  +upstreamnt  +downstreamnt atgaatctccatcaggtccttacaggagctgtcaaccctggagacaattgtttctctgta gggagcgtcaacaatgtgccattcacggcctatgcgtcaggttgcgacgtggtgattttg ggcagtgacttcgagcgactgcagatcatcccaggggccaagcatggcaacatccaggtc tgctgtgtcgactgctcactgcagggtggacagattgcagcttcctatggaagcattgtg tgcgtctttgagccggttcagcatccagatcaaaaagacactacactgactaagttgaat tgccaatggcagaagactggtcaatttgtattacagtctatggtacggaacctggcctgg caccccacaggctgtatgctcctaacaggctcgagtagcctccagttatggtccaatgtg actggagtgaaagatgaagctgaggaagtgggaacgcagacagaaatgaccattggagag actcattctgcctggaggtgcatctggcagagcaagatggcatctcaagtcagtttaatg aagttctctcctgatggggaattctttgcgactgctggtcaggatgactgcctggtgaag gtctggtacaacaccggtaagtggaagttgggtgtttccagactcttcacaccaccagag ccaagtgaatgtttccagggagagctggccttctcctttgtgtacctggcccatccccgc tctgttactggcttctcatggaggaagaccagcaagtacatgccacgcggcgcagtgtgt aatgttctgctcacctgctgtaaggacagcgtgtgtcggctctgggcagagacactgttg ccgggcgacggcctcctatctggttgccataacaaccacgcttttggccaacgcggtgac acaccaggatgtgctggcccttctagcaccacctgcaatgggaagttgccaggaagaaca gcacaagaattgaactttcaaagatacttgcttggctcttttcaccgggacgtcccgcag ccctccctgactagcggcctgcctcaccatcagagcaggcactacagccacaggaggagc agcagcaacatgccgcacgccaacgctctctgccacttccacattgctgccagcatcaac cctgccacagacattcctctgctgccctccatctcctctctgagttccgtggatgacgag gaacctggaggtctgtttactgtccactggctcaacaacaaagagctccatttcacttta gcaatggatgtcttcttgcagcagcttcgaggcagcctggagccacaggacaacggctcc catgaagtgcctgaagatgaggataactttgatgaggaagatgacagcagcaggccaagt gactcccagggacctgagtctgcagagcttcctctggcagcagtgaagcaccaggtggac gtgctgttagaagagtggaataaaggagcagacatgttgttcagtatccatcccatggac ggctctcttttagtctggcatgtcgactggttggatgaataccagccgggcatgttcaga caagctcaggtgtcgttcgtgtcccgtatacctgtagcgttcccaacaggtgatgcaatc tccttgagccacggtgtggttatgtatgcctgcaacaagaacgtggatctggccatccaa catggcagaaagcggccacctgggagcgcattgcctcaaaccaaatccgctctcataagt tacggaggtcaaggaaaggctgcacccagcagtagtctaagactcagcattttcaccccc aacgtcctcatgatttccaaacacgccgatggctcgctgaaccagtgggctgtcggcttc gcagaggactccgctttctctacagtgctcagcgtctctcacaagtcgaggtactgtggc caccgcttccacctcaacgacctggcctgtcactcattgctgcctctgctcctgaccacc tcgcaccacaacgccttgaggacgccagaggcagacggcatcctggcccctccggacgcc tactcctgtggtttctctcatccagcatttctgccccggggggcgcgacccagccgggtg tccctgggtgcagtgtcccaggatcccaacgcaatctacagtgaactgattttatggaga gtggaccctgtcggcccgctgtctttgtctggcggggtctccgagctagctcggatcaat tcccttcatgcatcggcgtttgctcaagtagcctggctgcccacattcatccccagcagc tgtttaggtgtgtactgtaactctcccagtgcctgctttgtggcaagcgacggccactca ctcaggctgtatcaggctgttattgaagctaagaaactcttgagtgagctctccaatcca gagatctcaaaatatgttggagaggtgtttaacatcatcagtcagcaatctacagcaaaa ccagggtgtattatagagctcgataccattactgactttcaggggaaggagacccagctc ctgcatgtttttgaggaggatctgatccttggcagtgagagaacagagagcacacagcaa actcctgattcccctcacactgcctcaagcaaggcggcgttctcggcacggtttttcctt gttgtggtcgaattgaccccgacaggtcgctcgctcctccacatgtggcatctccatctt gctgctcgacccatcaccatggaagagaccatgaaggagactgatgtgacctccgcttct cctatgaacagctctacgtttagctttgacgcgttcagttctccagtcggtcagaagagt aaaccctgcacttccaatctgcaaagtgcctgtcgcctcagcctcacaacacacaggcta tacagccaagagatggctctgcctgaaggggtggaagccatcagtgttacaccctcagca ggtcacttgagcgcgtcatgttctctgccagctgatcgtgtgccctacctccttgctact tcctgttctgatggaaaggtgcgcttctggaggtgtattgttattgcaacagggccctcc agtatggacagcttggtttaccaatgggaggagtggcctctgctggtggaggagaggctt cccaacagcagtgcagtgacggtgcaaggtcgtcccatagaggtcagctgctgccactcc ggactgattgcagttgcctacaagcagataccaaccacaccgtttatctcaacaccttat ctgaaccctctccaactgttgacttctcctcctaccctgtcttcctccccttatgtgcac aacaacaacacccaccccaccccaaccctgactgtacagcatagcccaaatctctctcta agccccaacgcagcaaacactagagagcctttggtccatattggcatcttccagtgtgag tccactggtggttcacagtggcatctagagcagaccatagtccttgacagcacagatccc acaaccggaagtaccaatattccaggtaacatggacctcactgtccacaacgaggactgt cctggttctacttttaagagcctggttcatttggactgggtctcccaagaagatgggtca catgttctgacagttggtattgggacaaagatttatatgtacggccgtctctctgggaaa cctcctgaactcggcttgacatctgatgccagtcgagaccggagctcgtcgctggttctg attcaatcagtcgatctggtctcctctgtcgaagggtcgttacccatcccagtctccctc tcctgggttagagatggaatcttggtagtaggcatggactgtgagatgcacgtctactcc cagtggcagccgccagcaccaatcaaacccaatgcccagattgcccaagacaccgacatc agcagcagcgactcctctataatctcagccatcaggcagagccaggaggacggtcccagc tccggggcccccatgtcttcacttgcgcctcccaaaaagtccctgacaagatcaatgatg agtctggctcagaaactcagtgggaagagaacagcttatgacctgcctgttgagatggag gattctgggcttttcgaagcagctcaccaactctttcccactctgccccagtaccatcct gtacagttactggagctcatggacctagggaaggttcaccgtgccaaagcgatcctgtcg cacctggtgaaatgcattgcgggagaaattgtggcacttaaagacagtaccaccaatcct gagaaacgtgtgcgctctcgaacaatcagcgctggaggaagcacagccagggatcggaag atgttcagcaaagcagagaacgccacccctgactacacggagataagctccatccctcca ctgcctctgtacgccctgctggcagccgatgaggacacatcaccaaaacctgataaagtg agcagtgtgagtggagatagtggacatggttccattcacactgatgtttatgatgagctc tttcatacacccaccgttgcagacctggaccccctggaagacgatcaagaggaaacgggg aacaaggttattgacctgtcccagtacagtccgacacactttggtccagaacatgctcag gttctgtccagtcacctccttcactccagtttgccgggcttaacccgtatggagcagatg tctctcatggcactggctgacaccatcgctaccacaagcactgacctcaaggacagccag ggcacaagcaaaggtggagagacgctggacgagtgtggtctgaagttcttgctggccgtc cgactccacaccttcctctctacctccctgcctccagcacaccgagcacagctgctgcgg caaggcctgtcaacatgtcattacgcctgggccttccactctgaggctgaagaggagctg ctgaatatgctgcctgccctacagaagggagagcccacctggcctgagctgcgctccatg ggcgtgggctggtggcttcgcagcagcaacaagctacgcaggtgtattgagaaggttgcc aagacgtctttacagagaaacaatgatcctctggatgcagctatattttaccttgcaatg aagaaaaaggcagtggtctggggattgtacagatctcagaagaatgccaaaatgacagag tttttccgcaacaacttcagcgaggaccggtggaggaaagcagccttgaaaaatgccttt gctctgttgggaaagcagcggttccggcattctgcagccttcttccttctagccggctcc cttaaggatgctgtggaggtgtgtttagagaaaatgcaggacctacagcttgccctggtg atctccaggttgtacgagtctgagtttgagatggcgtccacctacaaaaagatccttcag agacatgttctgggacaagacaaacagattcaagcccaccaggacccgttcctacgcagc atggctcactgggtcctggaggactacagtagagccttagacactctacttgagcagccg gcaaacgacatcagctctgggtccactgagagcaaatgtgatgcaggttcctcttcggtg tctacatgcaacccagaggttttcaacttttacacctaccttcgaacccacccacttctc cttcgtcgccattttggctccttagacaaggcgaaagttggactgacggctgagggccgc aggcctgactccattagcctggaggagaggaggctgtttttcacagctgcatacgcacac ctgcaagctggctgccccatgctagcgcttgaagtcctctccaagatgcccaaagtccgc aagcactccaagctgcccaaccaggcggatacaggcacggctgctgaactcagtgtcgga agcaagaacggacgaacatccaacccggattggtctcagccggctctgaacggctacgag tcggacggacaaagcttatccaacagccaatcggattcagtgttaagttttgactggagc cagcagtcactggcgcatacagatgagcccctggagctgaaatgggacagtgacaaagat gaagaagatgaggaagaagaatccaaaaatgtattcagcagcagtgtgttccaggacaca caggatgccatatcgccgcaaatggagacgttgacgggtgaggacggagagaactgcaat gacttccttgctccgtctaatgacatcttggccgcccagctgaagtttacggcctgcctg aagattatgaccaatgagctccggacgctgtcaaacggttatcaactggatggaggcaag ctacgttgccagctctaccagtggttggagagagaggtggtggcactccagcgttgctgc agctacaagccctgcttgccagagctgtctgtccagggtgatgcccccgtttctgggttg gtggaggaggaacagccaggaagtcctcatggtcacagccagaggagcaggagacactgg ctgcagagtaaccagcccttactgaggatgttcctgagctactgcagcttgcatggctct cacggtggaggactggcctctgtgcgcatggagctcatattattgcttcaagagtctcac caggatgactccactcagccagcggtgatgccatgttgtccgccaacatctattcccctc ctgatggcttgcacggccaacgtaaagacggtggtcgccaaccccatcgtctacctgacc aatctggctcatgacatcttgtggaccatcaattcactcgactctcctccacatccggat gtggctaacaatgagatctatgtgatgcacacactggctgcctccctctcagcctgtata tatcagtgtctttgtgatggacacacccacagccatgtgaaccagttcacaggaatcgtg tatcagagtgtgttgctgtcccagaagcagcctctcagaactgtcagtatggatgagtct gttcagcccaacacttcccctgcacagtggccaggtatcgcctcactgatccgcctgttg agctcagcaggcgaggagagccagccaggcttaactgtgctgctctgcgagatcctgact gctgtgttcctcagtctgtttgttcacggcatggccactcactccagcaacgagctgttt cgcatcgtggcccacccactcaacagcaagctttgggtggcggtgttcgggggaggcgcc cgcacccctgtcatcgagaaactcaacagcccgacaagaacacccccgccagcctcacca agcggctcggacaggaagtccagacgattcaggctcctgtcgtcacgcagtggctccagg gaggaagctgggaatgagcgggagcgcccatctagtcccaagcgtggccctgtagtggaa caagaagctgcctccatctttaaagaacgatttgtccctccagagcttagcatttgggat tactttatcgccaagccttcgctgccaccatcagaagaccgaatagaatatgactctgag gaaagccaggacagtcaggatgatgaagaggaggatgatgctgaatatgaagatgtgttt gaccccagctctccgcaaagggagcattcaaaccataattcatacagttggtgtttgatg cgactggctatggttcagcttgtgttggtcaacctcaagtccttctacccaatggcagga tatgatctattagatctgcctgtgggctctcctctttgtcacgctgtgctgaagacgctg cagcgatgggagcaggtgctgcagaaaaggctggagatcttcgggggccccccttccatg tacatctccaccctcctcaaggatgaaacggctgcaccgggccccgccctgctcagacac aaggccttgtttgaaccatccaacaccccgttcagaactagccaccattcggcactgccc gtgaagcgtctctggcagtttctggtcaaacaggaagaagtgcaggagactttcattaga aacatttttaccaagaaactggacccgaatgagtcgtgtgaggaccaggctgacaatatg aaatgttcagggatggaggagacgggaaacactcagactgagtcagacctgggctccacc ggaggaaaggcacgcatcatccacaaggaatctgacatcatcacggcctttgccatcaac aaggcaaaccgtaactgtttagtcatggcctccacccatgacattcaggagttggatgtg tcatccatcttggccacacagatcttgacatggatcgatgacgatgatgcagaagtcaaa ggtgttggcagtgatgacttcctggtggtccatgcacgggatgactttgccgctctccac ggcaccacaccgtacactcacagtagccccggcacacccatcaacatgccgtggctgggg ggggtgcagacgggccggggtgccgctgtggtgagctctagacctggagttatgatcaaa agaaacatcaacaatgtgagaagaatgacctcccatcccacgctgccttactacctgaca ggcgctcaggatggtagtgttaggatgttcgagtggggtcactcgcagcagatcatctgc ttcagaagtccaggcaactcccgagtaaccaggatacgattcaaccaccagggaaacaag tttggtatcgtcgacgccgatggaggtttgagtctctggcagaccaacacaagcgggatt gcacccaagccatacctgacgctgcagtgccacaacaagacggcgcacgactttgtcttc gtaggctcctcctccctcatcgccacggcaggtctttcaaccgacaacaggaacgtgtgt ctgtgggacactctggtcacgcctgccaacagcctcgttcacgctttctgctgccacgag tccggagctaccgtgcttttgatggcctccaggcagcagctgcttatcacaggtgggagg aagggctggatcagcatcctggagctcgcccacaggcaccagcgtcagagcttccaggcc cacgactcgcctgtcaaagccctggcggtcgatccgactgaggactgcttcatcagcgga tcagctgagggcaacattaagatctggagcctggccacgcagtgtgcgctctacaccttc cccaacgagcacgctcgtcagtcgttgttcaggaacctcggcacgggcgtcatgcagatc gaggtggggccgaccaatcacatcttctcctgcggcgccgacggcaccatgaagatgagg gtcctccccaaccgcttcagtgtcaacaacaacaacaacaaccacggcaacctcaagaac gacgtcaagttcatcatatag

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