Cyclopterus lumpus (lumpfish): 117736956
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Entry
117736956 CDS
T09199
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein isoform X1
KO
K10890
fanconi anemia group C protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117736956 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clum03400
]
117736956 (fancc)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
117736956 (fancc)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
Motif
Other DBs
NCBI-GeneID:
117736956
NCBI-ProteinID:
XP_034398531
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All DBs
Position
9:19926099..19952298
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AA seq
591 aa
AA seq
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MSQLQPPIQLRLAAEPLLDVQEMRFWLDKAVAWGQADRPDTQKDTALHLSRLRDFLQQLL
TLINNVSSTTETMKRLPLLGQFLGRLCWNPYVTADATGRRLLFQCLWGLYSELPGNAVET
KANQWIRKVLCQLATEEDDAPAQALMKQIGVPPEEYHLGVLRKMVALLQENIGKSCSSLG
DINQRCSCDSILATSEACVPLVTCPEAAPLIGALLQLPGTCVRAALSEDFLDAVSSAYSS
QCLLLEEQAVVSLWYHNLSSLEEAVLSLLECALTTSGSDPHKQLEQSLLPKACAQHCSMF
LVVNDIFRSILKQAEGKESVKYFIQAFTSCFLRERALQQQMRVSLKAMFPQSPSSLLLPL
LTRPSEMPQEAWRHHLNWLSGSLQRLTEEGEEGDGDNSASTRLARYHKVFESWFLLVQCA
HWVQVAVQLLVTSEPEDRGPLLWLLIFYHHPTNRGHHRARQLVHGKEAWDQLHSLFLTSA
RPLPVDRLQPLVALLSPQSQQPSLSPLLILNLVVNCAVFLQQTLSASTELIQTVVDRSGL
VDEAECVLSSLEFRLNEDNCLSSDTKRVHLRIHALQNTLTRMHAASRPAEN
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagctgcagcctccgatccagctccgactcgctgcagagcccctgctggacgtc
caggagatgcggttctggctggacaaagcagtggcgtggggccaggccgaccgcccggac
actcagaaagacaccgccctgcacttgagcagactgagggatttcctccagcaactgctc
acacttatcaacaacgtgagctccacaacagagaccatgaagaggctgcccctcctcggc
cagtttcttggccgactctgctggaacccgtatgtcactgccgatgctacgggcaggagg
ctgttgttccagtgtctgtggggactgtactcggagcttccaggcaatgctgtggaaaca
aaggctaaccagtggatacggaaggtgctgtgtcagcttgctacggaggaagacgatgct
ccagcgcaggcattgatgaagcaaattggcgttccacctgaagagtaccatcttggagtt
ctgagaaagatggtggcactgctgcaggaaaacattgggaagagctgcagttctttgggc
gacattaatcagaggtgttcatgcgacagcattctggccacatcagaagcctgcgtcccc
ctggtcacgtgtcctgaggctgctcctctcattggtgcactgctgcagctgccagggact
tgtgtcagggcagcactgagtgaagacttcctggatgctgtgagctccgcctactccagc
caatgcttgttgttggaggagcaggctgtggtctctctgtggtatcacaacctgtccagc
ctggaggaggccgtgctcagtctgctggagtgtgctctcaccacctcggggtcagatcct
cacaagcaactggaacagtcattgctgcccaaagcctgtgctcagcactgctctatgttc
ttggttgtaaacgacatcttcaggtccatccttaagcaagccgaagggaaagagtctgtt
aagtatttcatccaagccttcaccagctgtttcctcagggaacgggcactgcagcagcag
atgagggtatctttgaaggccatgttcccacagtcaccttcgagtctgctgcttcctctc
ttgacccgcccatcagagatgcctcaggaggcctggagacatcacctgaactggctcagc
ggctcattacagagactgacagaggagggagaggagggagacggagacaacagcgctagc
accagattagcgaggtaccacaaagtgttcgagtcctggttcctgctggttcagtgtgcc
cactgggtgcaagtggctgtccagctgctggtgacatcggagcccgaggaccgtggcccc
cttttgtggctgcttatcttctaccaccaccccactaaccgggggcaccacagagcacgg
cagctggtccacggcaaagaagcatgggaccagctacactccctgttcttgacctcagct
cgtcctctccctgttgaccgcctgcagccattggtcgctctgctgtcaccacaatctcag
caaccatcgctgtctccgttattgatcctcaacctggtcgtcaactgtgctgtttttcta
cagcaaaccctgagtgcatcaacagaactgatacagacggttgtggaccggtctggtctg
gttgatgaggcagagtgtgttctcagctcactggagttcagactaaacgaagataactgc
ttatcaagcgacactaaaagagttcatctcaggatccacgcacttcaaaacacactaaca
cgtatgcatgcagcatcacggcctgccgagaactaa
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