Cyclopterus lumpus (lumpfish): 117736968
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Entry
117736968 CDS
T09199
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117736968 (pdlim2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117736968 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
117736968 (pdlim2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DZR
SNAPC3
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
117736968
NCBI-ProteinID:
XP_034398546
Ensembl:
ENSCLMG00005009040
UniProt:
A0A8C2Z3U0
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All DBs
Position
9:13014151..13044902
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AA seq
366 aa
AA seq
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MALTVNIIGPSPWGFRIFGGRDFKKAITVSKVNGGSKAQQADLQPGDIILEINGENTADM
LNVEAQNKIKNSKTQLQLAVERPEPPSPGQTNGISTPEQLTGRFQEAVIVSRDENQNYKE
YTISSPASLSPGPYSSDPFSTPNGKRERLTPTTNKGVQLRPWSPEEKSHRLSRPLSQEFS
PSDYRNNSVSSRTPTPPGRYSPHSPVDRDVPMSPRRSSSSDFAMQKFDRDSEVYKMIQEN
KESRTAPRQSNTFKMLQEVLEADEKEAALQFPGKLSPNVPKESTSVGGAKKNHTCEKCGT
SIVTLAVRIADDRFRHSECYTCTDCSLNLKMRGHFCVGDLMYCEKHAKQRYQGLGGSPQA
TVSPRQ
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacggtgaacattatcggtccttcaccatggggcttcagaatatttggagga
agggacttcaagaaggccataactgtatcaaaggtcaacgggggcagcaaggcacagcag
gctgatctgcaacctggtgacattatattggagatcaatggggaaaacacagcagacatg
ctgaacgtggaggcccagaacaagatcaagaactcaaagactcagctgcagcttgcagtg
gagagacctgaacctcctagtcctggacagaccaacggcatcagcacccctgagcagctc
accggacgcttccaggaggcagtgattgtgagtagagatgagaatcagaactacaaagag
tacaccatttccagccctgcatcgctgtcccctggaccttattcttcagatcctttttct
acaccaaatgggaagagggagaggctgacaccgaccactaacaagggtgtccagctgcgt
ccatggtctccagaggagaagagccataggctgtccagaccgctgtcacaggagttctcc
ccttcagactacaggaataattcagtgtccagcagaaccccgaccccaccaggacgctac
tcgccccatagccccgttgatcgggacgtacccatgtcccctcgtcgcagttcgagctct
gactttgccatgcagaagttcgacagggactcggaggtgtacaagatgattcaggagaat
aaggagtcccgcacggcgcctcgtcagtccaacacctttaaaatgctgcaagaggtcttg
gaggctgacgagaaagaggcagcgctgcagttcccagggaaactttcgcccaacgtcccc
aaagaaagcacatcagtgggaggagcaaagaaaaaccacacctgcgagaaatgtggcacc
agcattgtcacactggccgtgcgcattgcagacgaccgcttccgccattcagagtgctac
acttgcacagattgcagtcttaacctcaagatgcgaggtcacttttgcgtcggagatctg
atgtactgtgagaagcatgccaaacagaggtaccaaggcctaggaggttcccctcaagcc
accgtgtccccgcgccaatga
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