Cyclopterus lumpus (lumpfish): 117736988
Help
Entry
117736988 CDS
T09199
Symbol
nipbla
Name
(RefSeq) nipped-B-like protein A isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117736988 (nipbla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117736988 (nipbla)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
117736988 (nipbla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
TOR1L1_N
Cnd3
UBM
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
117736988
NCBI-ProteinID:
XP_034398577
Ensembl:
ENSCLMG00005000282
LinkDB
All DBs
Position
9:16412733..16438347
Genome browser
AA seq
2529 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVTCLLGCRDEN
LASQLAHGLNQVSTEHIELKDNLGSDEPEGDAPLLLQTMLARNPGIFREKNVMQQPMVPT
YKITQNSLHSPAQPANFQPAAMSPNPPSRFVAPQTGSSSRYMGQNSPVPSPYTPQSPAPG
YIQQYPHQQPPSYNQHQQIQQVSVASPMVPGGIRNIHEGKVSGQMANAANHHSDRHGTED
YMNIVHRLSNEEGDSTMRNPSFSLRSPQSGCSPAGSEGTPKSGSRPPLILQSPPPYAPSP
REGGPVQNQQLQQRKKGPAVKEEKDLYDIVSSPNKDSTKLTLKLSRVKSNESDTPGDTLP
GMDENSDNMEAELGFQQVPVLQQNLARMQQHASSLQPPSSPYDEAELDALAEIERIEREA
ASEKCSKEVQDKDKPLKKRKQDSFPLEPGAGGPGGPTGAPGSGSTGGGNAGKLTPQEATA
AGNGASRPPLMVSIDLQQAGRADGQLDPCLAAPIPALEAQRWPEEPASGPAAVEGSDTAL
RLKPDGRPEVIKNRVDKHDSRRDGRESSKHRHDEKSSDRRGEMPKSLNRGEHGRDRDREA
DKDRRHRSETGGRDRRSPDSRCRSDRDRYRASSTGEPGRSGNRHDGSKPASSASGAKLPD
AFPAQLLGGHSGALKNFQIPKIKRDKDDSGPNESQMWGQPKVKLERLGLVQDFEKRPKPV
VVLKKLSVDQIQRIIRHSKSGKNRISSVRSSKGGMDPSVLKELPPELLAEIESTMPLCER
VKVNKRKRSTVNEKPKYAEVSSDEDYDANGESAKKRQRRDKDRSWDVEERDRRGSGEHRK
SGNRDSRRGSGSRYRDSSDEHSPPPSMTEIARKMKIKEKQKKRKAYEPKLTQEELMDSST
FKRFLTSIDNILENLEDVDFTAIAAADDDEIPQEFLLGKHQLSELGSESAKIKAMGISSR
IPSDKLVKLLNILEKNIMDGSKLSTMMSHDHDAEDEEKLWRDLIMERVTQSADACLTALN
IMTSGHMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDHGGGLLSSKAKRAKCST
HKQRVIVMLYNKVCDIVSNISELLDIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKL
VTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDQDGEPLYIQMVTALVLQL
IQCVVHLPNDKDIFDEYESKVDQDVLITNSYETAMRTAQNFLSVFLKKCGSKQAEEDYRP
LFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVAARL
RKDGVTSKMDQRSIDRILQESQGTDETQQLQKALLDYLEENAETDASLVFARKFYVAQWF
RDATTEAEKSMRNQNSKDEDSSDGPQHAKEMETTGDIMQRAEKRKKFLRNIIKATPAHFA
TLKMNSDTVDYEDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMKCLSEV
VAVDPSILARSDMQRGVHGRLMDNSTSVREAAVELLGKFVLSRPQLTEQYYDMLIERILD
TGISVRKRVIKILRDICLEQPTFNKITEMCVRMIRRVNDEEGIKKLVNETFQKLWFTPTP
NQDKETMTRKILNITDVVAACRDTGYDWFEQLLSNLLKSEEDASYKPAKKACVQLVDNLV
EHILKYEESLAENKGVNSTRLVACITTLYLFSKIRAQLMVKHAMTMQPYLTTKCNTANDF
MVICNVAKILELVVPLMEHPSETYLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTH
NYKFVWACFNRFYGALNKLKVQHHEDPNSTTLVANKPFLLRSLFTVGALARHFDFDLEEF
KGTNKVVIKEKVLELLIYFTKHEDEEVKTKAIIGLGFLVIMHPSQMFMPEVKTLYNGILA
DRASSINLKIQILKNLQTYLQEEDTRMQEADREWKKLSKQEDLKEMGDISSGMSSSIMQL
YLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMATDPEPSMRNKSDQQ
LVEIDKKYTGFIHMKAVAGMKMSYNLQQAIESSRRTIIRGFRQDETHSALCAHLFSMIRG
NRQHRRAFLISLLNLFDDSSKTEVNMLLFVADNMACFPYQSQEEPLFIMHHIDITLSVSG
SNLLQTFKELLLKEPRRKEKKVKVWKNASDGENEEERMNCDSPRSDGEENSDNDGVVRRP
KKARKPVADPESSESESDLDDLDLEDVEKVMRLVPDNPTGLLDFANAVQGILLLLVLKQH
LKNQYGFSDGKIQKYSPTESAKVYDKAVNKKSTVNFHPRQTIDFIANNMARATLSTDVKK
RIVRQYLDFKVLMEHLDPDEEDEEGEASASANIRNKAISALLGGSGPMSGPSPRNQAGPE
TDDDYSDGDERTPGSSRRSRRAGDSMNETVESMDVIALSCPKYKDRPQIARVIQKTSQGY
SIHWMAGSYSGPWAEAKKRDGRKLVPWVDTIKESDIIYKKIALTSNHKLSNKIVQTLRSL
YAAREGGAS
NT seq
7590 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactcttgctgggatcgctagcctcaca
gacttgttgaaccagctgcccctcccttcccctctcccggccaccaccactaagagcctc
ctatacaatgggaggattgcagaggaagttacctgcctactgggctgtcgggatgagaat
ctggcctcccagctggcccatggcctcaaccaggtgtccacagagcacatagagctgaag
gacaacctgggtagcgatgagccagagggagatgcaccactgctgctgcagaccatgctg
gccaggaaccctggcatcttcagggagaaaaatgttatgcagcagccaatggtaccaacg
tacaagatcactcaaaattccttgcatagcccggcccagcctgctaacttccagccggct
gcaatgtctcctaatccaccaagtcggtttgttgctccccagactggttccagtagtcgg
tacatgggccagaacagtccagtacccagcccctacactccccagagccctgcccctggt
tacatacagcagtatccccatcaacaaccacccagctataaccaacaccaacagatacaa
caagtgtctgtggccagtcccatggttccaggtggcatacgaaatatccatgagggcaaa
gtatcggggcagatggccaacgctgccaaccatcactcagacagacatggcacggaggac
tacatgaacattgtacaccgactgagcaatgaggagggtgactccaccatgagaaatcct
tctttctctctgaggtctccacagtccggctgctccccagcagggagtgaaggaacaccc
aaatcaggttctcgtcccccgctgattctgcagtcaccacctccctatgcgccctcaccg
agggagggaggacctgtccagaaccagcagctccagcaaaggaagaaggggcccgcagtg
aaagaggagaaagatttgtatgacattgtgagctctccaaacaaggactctacaaaactc
accctcaagttgtccagggtcaagtcaaatgagtccgataccccaggtgatactctgccg
ggaatggacgagaactctgacaatatggaggcagaactgggctttcagcaggtgcctgtt
ctccaacaaaatctagctcggatgcaacagcatgccagtagtctccagcctcccagttcc
ccgtacgacgaggcagagttggatgcccttgctgaaattgaaaggatagaacgagaggcg
gcgagtgagaagtgctccaaggaggttcaagataaagacaagccactgaagaagagaaaa
caggactcctttcccctggagccaggcgcaggaggaccaggtggccccacaggtgcccca
ggcagtggatcaacaggagggggcaatgctggcaaactgaccccgcaagaggccaccgca
gctgggaacggtgccagccgccctcccctcatggtgagcatcgacctccagcaggcaggc
cgagctgatggccagctcgacccctgtctggctgcccctattccagcccttgaggcccaa
cgctggcctgaagaaccagctagtgggccggctgcagtggagggttctgacacggctttg
cggttgaaaccagatgggcgacctgaagtcatcaagaacagggtcgataaacatgacagc
aggagagatggtcgagagtcatcaaagcaccgacatgatgagaagtcctctgacagacgg
ggagagatgccaaagtcattgaaccgaggcgaacacggacgagacagggaccgagaagct
gacaaagataggaggcatcggagcgagacaggtggtcgagaccgacgctcacctgactcg
cgctgtcgaagtgacagagataggtaccgggcttcttccactggggagcctggtcggagc
ggcaataggcatgatggttccaaaccggcatcctctgcctctggtgctaaacttccagat
gctttccctgctcagctccttggagggcatagtggcgcgctgaagaacttccagatccct
aagatcaaacgtgataaggacgacagtgggccaaacgaaagtcagatgtggggacagccc
aaggttaaactggagaggcttggtttggtgcaggactttgagaagaggcccaagcctgta
gtggttctgaaaaagctgtctgttgaccagatccagaggatcatcagacacagcaagtct
ggaaagaacaggatctcttcagtgaggtccagcaaaggtggtatggacccgtcagttctg
aaggagctgccaccagagttgctggcagagattgagtcaaccatgcccctgtgtgaaagg
gtcaaggtgaacaagaggaaacgaagcactgtaaatgagaagcccaaatacgctgaggtc
agctcggatgaggactatgacgcaaatggagagtctgcaaagaagcgccagcgcagagac
aaagacaggtcctgggatgtggaagaaagagatcgccggggttcaggggaacatcggaaa
agtgggaaccgggacagcagacgaggctcagggagccgctaccgagactcctccgatgaa
cactcaccgccacccagcatgactgaaattgccagaaaaatgaagataaaggagaagcag
aagaaacggaaagcatatgaacccaagctcacccaggaagagttgatggactcgtccaca
ttcaagaggttcttaacaagcattgacaacatactggagaatctggaggatgtggatttc
actgccatagcagcggcagatgatgatgagatacctcaagaatttctgcttggcaaacac
cagctgagtgaactgggcagcgagtccgccaagataaaggccatgggcatctccagcagg
atcccatccgacaagctggtgaaactgctgaacatactagaaaagaatatcatggatggg
tccaagctctccaccatgatgagccatgaccacgatgctgaagatgaggagaaactttgg
agagacctgataatggagagagtcacgcagtcagcagacgcctgtctgacagctcttaac
atcatgacctcagggcacatgccgaaggctgtctacatcgaagacgtcatcgagagggtg
ctacaatacaccaagttccatcttcagaacacactgtatccacaatacgacccagtctac
agggtggaccatggaggtggcctgttaagctccaaggcgaagcgtgcaaagtgctccaca
cacaagcagcgcgtgattgtcatgttgtacaataaagtgtgcgacattgtcagcaacatc
tcggagctcctagatatccagcttcttacagacaccaccatcctccaggtttcttctatg
ggaatcactccgttctttgtggagaatgttagtgagctgcagttgtgtgccattaaacta
gttacagcagtgttctcgcgttatgagaagcatcgacagttgatcttagaggagattttt
acctctctggccagactgcccaccagcaagcgctcccttaggaatttcaggctgaacagc
tcagaccaggatggagagccgttgtacatccaaatggtgacggctctggtgctgcagctg
atccagtgtgtggtccacctccccaatgacaaagacattttcgacgagtacgagagcaag
gtggatcaagatgtgttgataaccaactcgtatgagacggcaatgagaacagcacaaaac
ttcctctcagtcttcctcaaaaaatgtggcagcaagcaggcagaagaagattaccggcca
ttgtttgagaactttgtccaggatctgctctcgacagtaaacaaaccagagtggcctgct
gcagagctgctgctcagtctgcttggtcgactactggtccaccagttcagtaataagcag
acagagatggctctgcgagtagcatctctggactacctgggcacggtggctgctcgtttg
aggaaggacggcgtcaccagcaagatggaccagagatcaattgatcgaatcctgcaagag
tctcaaggtactgacgagacccagcagctgcagaaggccctactggactacttggaggag
aatgctgagactgatgcctccctggtgtttgccagaaagttctacgttgcccagtggttt
cgggacgccaccacagaagctgagaagtccatgaggaaccagaactccaaggatgaggac
tcatcggacggaccacaacatgccaaggagatggagaccaccggcgacattatgcagcgt
gccgagaagcgcaagaagttcctgcgcaacatcatcaaggcaacgccggctcattttgcc
acactgaaaatgaactctgacactgtggattatgaggactcctgtctgattgtgcgttat
ttggcctccatgaggccgttcgcccaaagctttgatatttatttaacacagatcttgcga
gtccttggggagagtgccattgctgtaagaactaaagccatgaaatgtctgtctgaggtt
gtggctgtggaccccagcatactggcacggtccgacatgcagcgtggtgtccacggtcgt
ttgatggacaactctaccagtgtgagagaggcagctgtggagctgctgggcaaatttgtg
ctgagcagaccccaactcactgagcagtactatgacatgctcatagagaggatactggac
actggtatcagtgtaagaaagcgggtaatcaagatcctcagagacatctgtctggagcag
ccaaccttcaacaagattactgagatgtgtgtgaggatgatccgcagggtcaatgatgag
gaaggtatcaagaaactggtgaatgagacattccagaagttgtggtttactccgactcca
aatcaagacaaagagaccatgaccagaaagatcctcaacatcactgatgtggttgcagcg
tgtcgagacaccggctatgactggtttgagcagcttctttcaaatcttctcaagtctgaa
gaggatgcgtcgtataagccagccaaaaaagcctgtgttcagctcgttgacaatctggtc
gaacacatactcaaatacgaggagtctcttgcagagaacaaaggtgtcaactcaacacgg
ctagtggcgtgcatcaccaccttgtacttattcagcaagatcagggcccagctcatggtc
aaacatgccatgaccatgcaaccctacctgaccacaaagtgtaacactgccaatgacttc
atggtcatctgcaatgtggcaaagatcttggagcttgtggttcctctgatggagcacccc
agtgaaacttaccttgcaactatcgaagaagacctcatgaagctgatcatcaaatacggc
atgacggtggtccagcactgtgtgagctgtcttggagctgttgtcaacaaagtcacgcac
aactataagtttgtctgggcctgcttcaacagattctatggtgcacttaacaagctgaag
gttcagcatcacgaggatcccaacagcacgacgttggtagcaaacaagcctttcctgctg
cgatcgctcttcactgtgggtgccctggcccggcactttgattttgatctggaggagttc
aagggcacaaacaaggttgttatcaaggaaaaagttctcgagctgctgatatacttcact
aaacatgaggacgaggaggtcaagaccaaagccatcatcggcttaggcttccttgtgatc
atgcatcccagccaaatgtttatgcctgaggtgaagaccttgtacaacgggatcctggct
gacagggcctcctcaatcaacctcaaaatccagatcctcaaaaacctccagacgtacctt
caggaggaagacacgcggatgcaggaggcagacagagaatggaagaaactgtccaaacag
gaggatctgaaggagatgggagacatctcttcagggatgagcagctccatcatgcagctt
tatctaaagcaggtgttggaggcgttctttcacacccagtccagtgtacggcactttgct
ctcaacgtcatcgctctcacactcaaccagggtctcatccatcctgtgcagtgtgtaccc
tacctcattgcaatggcaacagacccggagcccagcatgaggaacaaatctgaccagcag
ttggtggagattgacaagaagtacacaggattcatccatatgaaggcagtggctgggatg
aagatgtcatacaacttgcagcaggccatcgagtcgtctcgtaggaccatcataagaggt
ttccgacaggacgagacgcactcggcactctgcgcccacctcttctcgatgatccggggg
aaccggcagcaccggagggctttcctcatctcactgctgaacctcttcgatgacagctct
aagactgaagtaaacatgctgctgtttgtagcagacaacatggcctgtttcccataccag
agccaggaggagcctcttttcattatgcaccacatagacatcaccctgtcggtctcaggc
agcaacttgttgcaaaccttcaaagagcttctgctaaaggagccgaggcgtaaggagaag
aaggtaaaagtgtggaagaacgcgtcggatggagagaatgaagaggaaaggatgaactgc
gattctcctcggagcgatggggaagaaaacagcgacaatgacggtgtggtacggcggccc
aaaaaggccagaaaacctgtagctgacccggagagctcagagtccgaatctgatctggac
gatttggatctagaggatgtggaaaaagtaatgaggctcgtcccggacaatcctacaggt
ctcttggactttgctaatgctgttcagggcatcctgttgctgctggtgctcaaacagcat
ctgaagaaccaatatggattctctgacggtaaaattcagaagtactctccgacagagtca
gccaaggtgtacgataaggcagtgaacaaaaaaagcacagttaacttccacccacgacaa
accatcgacttcatcgccaacaacatggctcgcgccacactgtcaacagatgtgaagaag
cgtattgtcagacagtatctagatttcaaggttctgatggaacatctggacccagatgag
gaggatgaggagggagaagcgtcagccagcgccaacatcagaaacaaagccataagcgcc
ctactgggaggctctggccccatgtcaggacccagtccgcgcaatcaggccggtccagag
actgatgacgattatagtgatggagacgaaaggacgccagggtcctctcgaaggtcaagg
cgagcaggtgactccatgaacgagacagtggaatctatggatgtgattgccctttcctgc
cccaaatacaaggaccggccgcaaatagctcgagtcatccagaagacctcccagggatac
agcatccactggatggccggctcctactcggggccatgggcagaggccaagaaacgtgac
ggacgcaaactggtgccttgggtggacactattaaggaatcggacatcatttacaagaag
attgccttgaccagcaaccacaaactgagcaacaaaatagtacagactttacgctcactg
tatgcagcgcgggaaggaggagctagctaa
DBGET
integrated database retrieval system
