Cyclopterus lumpus (lumpfish): 117737169
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Entry
117737169 CDS
T09199
Symbol
lrrtm2
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 2
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
117737169 (lrrtm2)
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRRNT
Calcyon
DUF4064
TMEM154
Motif
Other DBs
NCBI-GeneID:
117737169
NCBI-ProteinID:
XP_034398797
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Position
10:9114075..9116526
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AA seq
544 aa
AA seq
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MGFHSRWPLVGPAPAALCLISMLLVCLLPPASCTTCPQKCRCEDLQFYCDTQGLQAPPDG
VDKGALGLSLRHNSITELSPDQFYGFSQLTWLHLDHNQITTVQEDAFQGLYKLKDLNLSS
NRITKLPNTTFIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNLLRTTPVRAFW
DCRSLEYLGLSSNRLRSLARNGFAGLIKLKELHLEHNQLTKINLAHFPRLVALQFLYLQW
NKISNLTCGMEWTWTTLEKLDLTGNEIRVLTSDVFQTLPNLKILLLDNNKLSSLDSQVMD
MWQSLGTIGLSSNYWECTKRICSLATWLSTFKGRWEHSILCHSPEYAQGEEILDAVYGFQ
LCQNFSAPVVQTISTTTDATIAAEITSSLFGIMQPTPTQDYAEDFGSFTTVTTTTTTTQR
TAQATTATLEEAAVTEDSSAMDNTVMTHRVIIGTMALLFSFFFIIFVVYISRKCCPPTLR
RIRHCSAIQNRRQMRTQQRQPMADLATQVPYNEYEPSHEEGALVIINGYGQCKCQQLPYK
ECEV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggtttccattcaaggtggccattggtgggacctgcaccagcggctctgtgtctgatc
agcatgctcctagtgtgcctgctgcctcctgcatcgtgcacaacctgccctcaaaaatgc
cgctgtgaggacctgcagttctactgcgacacccaggggcttcaggcgcccccagatggt
gtggacaagggggccctggggttgtcactacgccacaatagcatcactgagctcagccct
gatcagttctatggcttcagccagctcacctggctacatctagaccacaaccagattaca
acagtacaagaggatgcctttcaagggctctacaagctgaaggacctcaatctgagctcc
aatcgtatcaccaagttgcccaacacaaccttcatccacctcatcaacctccagatacta
gacctgtccttcaatcagatgactgcattggaaccagaactgtttcatggactgagaaag
ctccagatactccacctgcgctccaatttacttcgcaccacacctgttcgtgcattctgg
gactgccgcagcctggaatatttgggtctaagcagcaaccgtctacgcagcctggcccgc
aatggatttgctgggctcattaagcttaaagagctccacttggagcacaatcagctgacc
aagatcaacttggcccatttccctcgtcttgtcgctctccagtttctctatctgcagtgg
aataaaatcagcaacttaacatgcggcatggagtggacctggaccactttagagaagcta
gacctcacagggaatgaaattcgtgtcctgacatctgatgtgtttcaaacgctgccaaat
ttaaagattttgctgctggataacaacaaactaagcagtctggactcccaagtcatggat
atgtggcagtcactgggtaccattgggctgtccagcaactattgggaatgtaccaaaagg
atttgctctctggccacttggctaagcacctttaagggaaggtgggaacattccatcctc
tgccacagtcctgaatatgcccaaggtgaggagatacttgatgccgtttatggattccag
ctttgccagaatttttcagcgccggttgttcagaccattagcacaaccacagacgctact
attgctgcagagatcacaagctccttgtttggaattatgcagccaacccccacgcaggac
tatgcagaggattttgggagctttaccacagtcactaccacgacaaccacaacacaacgc
actgctcaagcaactactgctacattggaagaggcagctgtaacagaggactcctctgca
atggacaacactgtaatgactcatagggttatcatcggaactatggcccttctattttca
ttcttcttcatcattttcgttgtgtatatctcacggaagtgctgccctcccaccctgcgc
cggatacgccactgttcggctattcagaaccgcagacagatgaggacccagcagcggcag
cctatggcagatctagctacacaagtaccctataatgagtacgagcccagccatgaagaa
ggggcactcgtgatcataaatggctatgggcagtgcaagtgtcagcaactgccttacaaa
gagtgtgaagtatga
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