KEGG   Cyclopterus lumpus (lumpfish): 117737170
Entry
117737170         CDS       T09199                                 
Symbol
kdm3b
Name
(RefSeq) lysine-specific demethylase 3B isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:clum03036]
    117737170 (kdm3b)
Enzymes [BR:clum01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     117737170 (kdm3b)
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117737170 (kdm3b)
SSDB
Motif
Pfam: PWWP_KDM3B Tudor_KDM3B JmjC DUF7030 Cupin_2
Other DBs
NCBI-GeneID: 117737170
NCBI-ProteinID: XP_034398798
Ensembl: ENSCLMG00005008574
LinkDB
Position
10:complement(11286567..11304193)
AA seq 1797 aa
MEVSLELVGKRLLLLLDDGRSANGSEPEPAAWSRDWLRGTVRAVSVIGLQVPEVSGEEAT
TTPAAAAGLTVFVEFENALQRCSWVQVFDKGVKAVLVEDSIVWASRSDGSTGTAGAPASS
TAWPALVFRSLVDRVGLGSLVPVEYFGNKNFEFLPDNKTVQRFEVDKDIRHPLLLEQPSL
QTAISSWRADFELQEIFRKGSYTIQGRRVRVYQPEFEECWASGLVSQHDPISHIMEITID
KGENQTVDPRVIHVMLAEELGKNGRRRKDSETMKGDCGRRRRTASEGDDDLNLKRFKGAV
DAGADGQKCGDSNKMPAEGMGIWGGDSAERVSSTTKNGSSSEGTFAQGRVSSPNTNSSLQ
MDQSNATPRHPAHVKENGRSLSTQGAADSTTAVTHTPTPPPLKPAPSPFSTTSFPSLGQM
PSLVPGAPVPKASPAPQPDRDEAFQSAYSKTAALVSPGPVTISWSHDSGPSVALSASVGF
SPKAPTWGSQTEGSKTASGFCLPQTVPTASVFGDVTSQTNGAPTTTTASQDTPRPFGFGF
GGAKNETQSKQDQNLFFQCMTQNSGSSPSPAAGPTQSKDTNYFTAVSESLSKEPPSLFKP
TTSTEGLKKPEQPKVPESHSSGNGVLNKSSLAFQGMGGSAGGRGSGINVGGLTGAAGASQ
SMSKKSSNGTSVGGLGLQSGFNTSDSHQNLFLQASKEPANPFLAYGDKTSHTSFAGLTGA
EPQTLGHASDSKPNLFTMAEPPKGILSSSFPVLSAAASPSSSSSPAPISSQRSQSDGTVT
KEALEAGEMPTSTSGCPMFGSTGPGGMEEVPVSFDQSQSQKFTLEERGQSSKRDSDSSSN
SDLSDLSDNEEGPEKGQIPGGPLHPAKDGAMLQKAKIQGAAKGRPRNKPFKVGQSVLKDQ
SKVRRLKQSGESFLQDGSCINVAPHLHKCRECRLERYRKYRTTGEDSDDDHDPNVSCRFF
HFRRLAFTRKGVLRVEGFLSPQQSDSMAMGLWLPAPAVLEGLDLDTSKYILANVGDQFCQ
LVMSEKEAMMMVEPHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLR
RNRPREDVDEGPEDEVFSWLKCAKGQPHEPQNLMPTQIIPGTALYNIGDMVHSARGKWGI
KANCPCTSRHTKPLVRPGAPNGISQQSTTGSSGILAGAASGICITLKSEGETSAIKTETT
QTAAPSDSGGGESVGSVSNSTSGTSSPCNLIQSSAKESRSSGEGNTSALHWLADLATQKA
KDDTKESGSLRSMMSRDSRPPFGLDSLSALSKPSASSPKLFNSLLLGSSMTQSKPEGSSL
RDLLNSGPGKLPQGPGESGVPFPSVFTSTGSDKLKSSLPNFLDHIIASVVETKKAEGRRT
GASEGGELGVLGSRKDGVMGLSVLEPHTSHSWLCDGRLLCLQDPSNSNNWKIFRECWKQG
QPVLVSGIHKRLKGDLWRPDAFSREFGDQDVDLVNCRNCAIISDVKVRDFWDGFEVISKR
LQDSEGKPMVLKLKDWPPGEDFRDMMPTRFDDLMDNLPLPEYTKRDGRLNLAARLPNFFV
RPDLGPKMYNAYGLTSSEDRKVGTTNLHLDVSDAVNVMVYVGIPQIEGDPEQEADINGRK
EVMTTIEEGDVDEMTKRRVYEAKEKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDH
DPIHDQSWYLDQVLRRRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDF
VSPEHVKHCFRLTQEFRHLSTTHTNHEDKLQVKNIIYHAVKDAVGTLKAHEPKLTRP
NT seq 5394 nt   +upstreamnt  +downstreamnt
atggaggtctcacttgaactggtaggaaagcgtctgcttttgctcctcgacgacggtagg
tctgcgaatggttcggagccggagccggctgcgtggtcccgggactggctccggggcacg
gtgcgggcagtgagcgtcatcggcctgcaggtcccggaggttagcggggaagaggcgaca
acaacacccgctgctgctgcggggctgacggtatttgtggagtttgagaacgctttgcag
cgctgttcttgggtgcaagtgtttgacaagggggtgaaagccgtgttggtggaagactct
attgtttgggccagtcgaagtgatgggagtaccgggactgctggagccccggcatcatcc
acagcctggcctgctctggtcttccgctccttggtggacagagtgggtttaggatcgttg
gttcctgtggagtattttggaaacaagaactttgagttcctacctgataacaaaactgtc
cagaggtttgaggttgataaagacataagacacccgttgctgttggagcagccctcactg
cagactgccatttccagctggcgtgctgactttgaactgcaggagatcttcagaaagggt
tcatacactattcaaggacgcagggttcgcgtgtaccagccagagtttgaggaatgctgg
gcttcaggactggtctcgcagcacgacccgatctcacacattatggagattaccatagat
aagggcgaaaatcagacagtagatcctcgcgtaatacatgtcatgctggcagaggagctt
ggtaagaatgggcggcgaaggaaggacagtgaaacaatgaaaggtgactgtggacgcaga
cgtaggactgcctctgaaggtgatgatgacttgaacttgaagcgttttaaaggagcagta
gatgcgggagctgatgggcaaaaatgtggcgactccaacaaaatgccagcagaagggatg
gggatctggggaggagactctgcagaaagagtcagcagcacaaccaaaaatggaagctct
tcagaaggaacctttgctcagggcagagtgtcgtccccaaacaccaactcctcactccag
atggaccaatcgaatgctactcctcgtcatcctgcccatgtcaaagaaaatgggcgctca
ctctccacacaaggagcagcagattccaccactgcagttactcacacccccacccctccc
cccctgaaaccagccccctctcccttctccaccacatctttcccctcgctaggccagatg
ccaagcctggtccctggagctccagtccccaaggcctctccagcccctcaaccggaccga
gatgaggccttccaatcagcttattcgaaaacagctgctcttgtttccccagggcctgtc
accatttcttggtcgcacgacagcggcccaagtgtggcactttctgcgtctgtgggcttt
agtcctaaagcccccacctggggaagccagactgagggctccaaaacggcatcaggcttt
tgtttgccccagactgtgcccacggcttctgtatttggagatgttacctctcagaccaat
ggcgctcctaccactacgactgcctcacaggacactcccaggccctttggctttggcttt
ggcggagcaaagaacgagacacaatccaaacaagaccaaaacttgtttttccagtgcatg
acccagaattctggatccagcccaagtccagctgctggtccgacccagtccaaggacact
aattacttcaccgcagtgtctgaaagcttgagtaaagagccccctagccttttcaagcct
acaacctccactgaagggctgaaaaagcctgagcagcccaaagtgcctgagagccattca
tcaggaaatggtgtgctcaacaaatcttcattggccttccagggcatgggtggctctgca
ggaggaagaggttctggtataaatgttggtggtctgacaggggctgctggagcttctcaa
agtatgtctaagaagagcagtaatgggacttctgtgggaggcttagggctgcaatctggt
tttaatacttcagatagccaccagaacctttttctgcaggcctccaaagagcctgctaat
ccatttctggcatatggggacaaaacctcccacacctcctttgctggcctcactggggct
gagccgcagacccttggccatgcctcagacagcaagccaaaccttttcaccatggcagag
ccaccgaaggggattttatcttcctctttcccagtgctctcagcagctgcttcacccagc
tcttcttcctctccagcaccaatctcatcacagaggtcacagagtgatgggactgtgaca
aaggaggcactagaggctggagagatgcctacatccacctcaggctgccccatgtttgga
agcactggtcctggtggaatggaggaggtccctgtgtcctttgaccagagccaatctcag
aagtttaccctggaggaaagaggccaatcctcaaaacgtgactctgactctagcagcaac
agtgacctgtcagacctaagtgataatgaagagggccctgagaaaggccaaatcccagga
ggacctcttcaccctgccaaggatggggcaatgttgcagaaagctaaaatccaaggggct
gctaaaggccggccacgtaacaagcctttcaaagtgggccagtctgtactaaaagaccag
agcaaagtgcgtcgtctgaagcagtctggtgagtcctttctccaggatggctcctgcatc
aatgttgcccctcacttgcacaagtgccgtgagtgccgcctggagcgctaccgtaaatat
cgtactacaggcgaagatagtgatgatgatcacgacccaaatgtgtcctgtcggttcttc
cacttcagaaggttggctttcactcgtaaaggtgtactgcgtgtggagggcttcctgagt
cctcagcagagcgattccatggccatgggtctgtggctacctgcaccagctgtcctagag
ggccttgaccttgatacatccaagtacatcctggccaatgtgggagaccagttctgtcaa
ttggtcatgtctgaaaaggaggccatgatgatggtggaacctcaccagaaagtggcgtgg
aaacgtgccgtgcgaggtgtcagagaaatgtgtgacgtgtgtgagaccaccctgttcaac
attcactgggtgtgtcgcaagtgtggctttggagtgtgtctggactgctatcggctccgt
aggaacaggccaagggaggatgtagatgaaggtccggaggatgaggttttctcttggttg
aagtgtgccaaaggccaacctcacgagccacagaaccttatgcctacgcagattatacct
gggacagcgctttacaacataggtgacatggtgcactcagcgagaggcaagtggggtatt
aaggctaattgtccctgtaccagtcgacacactaagcctctagtacgccctggtgccccc
aatgggatttcacagcagtctacaacaggtagtagtggaatcctcgcaggtgcagcgtct
ggtatttgcatcaccctaaaatcagagggagaaacatcagccatcaaaacggaaactacg
caaacagcagcgccatcagacagtgggggaggagaaagtgtgggcagtgtcagtaactca
accagtggtacatcctccccctgtaacctcatccagtcctctgccaaggagtctcgctca
tcgggcgagggcaacacctctgctctgcactggctggcagacttggctacacagaaagcc
aaggatgacaccaaggaatccggttctctgcgctccatgatgagtcgagacagccggcct
ccctttggcctggactcactcagtgccctgtcaaagccttctgcttccagtcctaagcta
tttaacagtctgttactgggctccagcatgacccagtccaaacctgaggggtccagtctc
cgggatctgctcaactctggaccgggaaagctcccccaggggcctggagagagtggggtg
ccattcccttctgtatttacctcaacagggagtgacaagctgaagagcagcctcccaaac
ttcctggatcacatcatcgcctccgttgtggagaccaagaaggcagaaggccgtcggacc
ggggcgtctgagggcggcgagctcggtgttttgggcagccgcaaagacggagtaatgggc
cttagtgttttggaaccacatacctcacattcctggctctgtgacggacggctcctctgc
ctacaggaccccagcaacagcaacaactggaaaatcttcagagagtgctggaagcaggga
caacccgtgttggtgtcagggatacataaacgcctgaaaggtgatttgtggcggcctgat
gccttcagtagggagtttggagaccaggacgtagacctcgtcaactgtaggaactgtgct
atcatttctgatgtgaaggtccgagacttctgggacggcttcgaggttatctctaagcga
cttcaagatagtgagggcaagcccatggtgttgaaattaaaggattggccaccaggtgaa
gacttcagggacatgatgcccacacggtttgacgatctgatggataaccttcctttgccc
gagtacacaaaaagagatggtcgtttaaaccttgctgcccgtctgcccaacttttttgtg
cgtcctgacctcggacctaagatgtacaacgcctatggcttaacctcttctgaagacagg
aaagtgggaaccactaatctccatctggatgtctctgatgctgtcaacgtaatggtctat
gttggtatccctcaaatagagggagacccagagcaagaggcagatatcaatggacgcaaa
gaggtcatgaccactattgaggagggtgatgtagatgaaatgacaaagagaagggtatac
gaggcaaaggaaaaacctggagctctctggcacatctacgctgccaaggatgctgagaag
atcagagaacttctccgcaaggtgggagaggagcagggtcaagagaaccctccagaccac
gaccccattcacgaccagagctggtacttggaccaagttctccgccgcaggctctatgaa
gaatatggcgtccagggatgggccattgtacagttcttaggagatgccgtatttatcccc
gctggagcgccacaccaggttcacaacctgtacagctgtatcaaggtggcagaggacttt
gtgtctcctgagcatgtaaaacactgtttcagactgacgcaagagttcagacacctgtcc
acgactcatacaaaccacgaagacaagctacaggtgaagaacatcatctatcatgcagtg
aaggacgctgttgggacactgaaggcccatgaacctaaactaacacgcccttag

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