Cyclopterus lumpus (lumpfish): 117737173
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Entry
117737173 CDS
T09199
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1
KO
K15516
fragile X mental retardation protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117737173 (fmr1)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117737173 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
117737173 (fmr1)
mRNA cycle factors
Stress granule specific factors
117737173 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_9
FXMRP1_C_core
Tudor_FRX1
FXMR_C2
KH_1
Agenet
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
117737173
NCBI-ProteinID:
XP_034398802
LinkDB
All DBs
Position
10:5758115..5771841
Genome browser
AA seq
629 aa
AA seq
DB search
MDELVVEVRGTSGAFYKAFVKDVLEGSVTVAFENNWQPERQITFQDVRFPPPTGLCKEIN
ESDEVEVYSRANDKEPCGWWLAKVRMVKGEFYVIEYAACDATLNEIVTLERLRAVNPNKP
ATKTTFIKISLEVPEDLRQMCSKESAHKDFKKAVGAFNVIYDSEKKQLVILSVNEVTTKR
ANMMSDMHFRSLRTKLSLMLRNEEANRQLENSRQLASRFHEQFAVRDDLMGLAIGTHGAN
IQQARKVPGVTNIDLDEETCTFHIYGEDQDAVRIARSFLEFSEDIIKVPRNLVGKVIGKN
GKLIQEVVDKSGVVRVRIEPENDKKPSAAAAAAADEGMVPFVFVGTKESISNATVLLDYH
LNYLKEVDLLRLERLQIDEQLRQIGGGGGGGGTGPRNLKDKTYVFDNGMGLGMGMGMGMG
MGMGMGRGGAGGGGGIGGGGGGKPYGGRGGRGGRGQRGAGGAAFASGTNSEASNASETES
DHKDELSDWSLAPTEELLTGGGTMPRRTDGRRRAGGGGLRGRGGRGRGGGGYKGDDMQWS
EPRPRHVRDPKTRAQEDTLQIRVDGNNERSVQHSSGGRGGGGPSSQGGVGGGVGGGGSEG
PLRHHQRPIRDRGMKKDKQDAPPLVNGVS
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggacgaactcgtcgtggaagtgagggggacgagcggagccttttataaggcctttgtg
aaggatgttctcgaaggatcggtcacggtggcattcgaaaacaattggcagccggagcgt
caaatcacattccaggatgtgcgttttcctcccccaacgggcctctgcaaggagatcaac
gagagcgacgaggtcgaggtatattccagggctaatgacaaggagccatgtggatggtgg
ctggcgaaggttcgcatggtcaaaggagagttttacgtaatagagtacgccgcgtgtgac
gctacgctaaatgagatcgtgacgctggagcggttacgggcggtcaaccccaataaaccg
gccaccaaaaccaccttcatcaagatcagcctggaagtacccgaggatctacggcagatg
tgctccaaggaatcggcacacaaagacttcaaaaaagcagtgggagcgttcaacgtcatc
tacgactctgagaaaaagcagctggtcattttgtctgtgaacgaggtcaccaccaagcgg
gccaacatgatgagtgacatgcacttcaggagcctccgcaccaaactgtcactcatgctg
aggaacgaggaggccaacaggcaactggagaattccaggcagctggcgtcgcggtttcat
gaacagtttgccgttcgtgacgatctcatgggtctggccatcgggacccacggggccaac
attcagcaggcccgtaaagtccccggagtcaccaacatagacctggacgaggagacgtgc
acctttcacatatacggagaggaccaggatgcagtgcgcatagcgcggagtttcctggag
ttctccgaagatatcatcaaagttcctcggaacttagtagggaaggtgatcggcaaaaac
ggcaagctgatccaggaggtggttgataagtctggggtggttcgggttcgcattgagccg
gagaacgacaaaaagccctcggcagcggcggcggcagcagcagacgagggaatggtgccc
tttgtgtttgtggggaccaaggaaagcatctccaatgctacagtgcttctggactatcac
ctcaactaccttaaggaggtggatctgcttcgcctggaacgccttcagatcgacgagcag
ctgagacagatcggagggggaggtggaggaggggggacggggccgcggaacctcaaagac
aaaacctacgtgttcgataacggcatggggctgggcatgggcatggggatggggatgggc
atggggatggggatggggagggggggagcaggaggcggcgggggcatcggaggaggagga
ggaggcaagccctacggaggaaggggaggaagaggcggcagagggcaaagaggagcagga
ggtgcagctttcgcctcaggcaccaactcggaggcgtccaacgcctcagagacggagtcg
gaccacaaagacgagctcagcgattggtcgctggcccccaccgaggagctgctgacagga
ggcgggaccatgcccagacggacagacgggaggaggagagcaggcggaggagggctgcgg
ggacgaggggggagaggaagaggaggaggagggtacaaaggtgacgacatgcagtggagc
gagcctcggcctcgtcatgtccgagaccccaagacgagagcgcaggaagacacgctacag
atccgcgtggatggtaacaacgagcgcagcgtgcagcactcctcgggggggaggggaggc
ggcgggccctcgtcccagggtggcgtcggcggtggcgtcggcggaggcggcagcgaaggg
ccgcttcgccaccatcagagacccatcagagaccgagggatgaagaaggacaaacaggac
gctcctccactggtgaacggagtgtcatag
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integrated database retrieval system
