Cyclopterus lumpus (lumpfish): 117737215
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Entry
117737215 CDS
T09199
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00061
Fatty acid biosynthesis
clum00071
Fatty acid degradation
clum01100
Metabolic pathways
clum01212
Fatty acid metabolism
clum03320
PPAR signaling pathway
clum04146
Peroxisome
clum04216
Ferroptosis
clum04920
Adipocytokine signaling pathway
Module
clum_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
117737215
00071 Fatty acid degradation
117737215
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117737215
09143 Cell growth and death
04216 Ferroptosis
117737215
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
117737215
03320 PPAR signaling pathway
117737215
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
clum01004
]
117737215
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117737215
Enzymes [BR:
clum01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
117737215
Lipid biosynthesis proteins [BR:
clum01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
117737215
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of breast milk
117737215
Exosomal proteins of breast cancer cells
117737215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
117737215
NCBI-ProteinID:
XP_034398871
Ensembl:
ENSCLMG00005009025
UniProt:
A0A8C2ZS07
LinkDB
All DBs
Position
10:4261337..4276634
Genome browser
AA seq
698 aa
AA seq
DB search
MLSQDFLQKLKLPDLDNVSQYIRNVSTPVLVSVGAVAAATTYYLATRPKALPPVCDLCMQ
SVEVPGGELARRSVLLNGEAHMSHFYNDARTMYECFLRGVRVSNNGPCLGSRKPKQPYEW
ISYREVMQRTENLGSAFLHKGHSKTVDPHVGIFSQNRPEWTISELACYTYSLVSVPLYDT
LGTEAISYIIDKASISTIVCDVEDKANLVLDCVRHRTHSVKNIVLMETPSVDLVHRGQRA
GIHILSLQEMEAIGKANHQRPLPPQPEDMALICFTSGTTGNPKGAMLTHRNVVSNCSAFI
RMTEVSCPLSCSDVHISFLPLAHMFERVVQGVMLVHGARIGFFQGDIRLLSDDLNTLKPT
VFPVVPRLLNRMYDKIFGQANSSLKRWLLGFAYRRKEAEMRRGIVRRDSIWDQLIFRKVQ
ASLGGRVRLMLTGAAPISPTVLTFLRAAIGCQFYEGYGQTECTAGCTMTMPGEWNAGHVG
APLPCNSIKLVDVPEMKYLAVNGEGEVCVKGPNVFQGYLKDTEKTAEAIDADGWLHTGDI
GKWLPNGTLRIVDRKKHIFKLAQGEYIAPEKIENMYIRSDAVAQVFVHGDSLQACLVAVV
VPDPDFLSSWAKRTLGLEGSYRELCGRAEVKAAILEDMVRLGKEGGLKSFEQVRSIYIQT
QLFSIENGLLTPTLKAKRNEMRQYFKAQIDELYAGIKM
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgctgagccaggacttcctgcagaagctgaagttgccagatcttgataatgtcagccag
tacatcaggaatgtctccaccccggtgctggtcagcgtgggggcagtggctgctgcgacc
acctactacctggcaacacggcccaaggccctcccacctgtttgcgacctctgtatgcag
tcagttgaggttccgggtggagagttggcacgccggtcagttctgttgaacggagaagct
cacatgtcacatttttacaacgacgccagaacaatgtatgagtgcttcctcagaggggtc
cgagtctccaataacggcccctgtctgggctccaggaagccaaaacagccgtatgagtgg
atttcctacagagaggtaatgcagcgaacggagaatctgggttcagcatttcttcacaaa
ggacactccaagaccgtggacccccacgttggcatcttctcccagaacagacccgagtgg
accatcagtgagctggcatgttacacctattctttggtgtcagtcccgctgtacgacaca
ctgggaacagaagccatctcctacattatagacaaagcttccatctcaaccatcgtgtgc
gacgtggaggacaaagccaacctggtgctggactgtgtccggcacaggacgcactcagtg
aaaaacatcgttctgatggagacccccagtgtggacctggtccacagggggcagcgggct
ggaatccacatcctcagcctgcaggagatggaggccatcgggaaggccaaccatcagcgg
ccattgccgccgcaaccggaggacatggctctcatctgcttcaccagcggaacaacagga
aacccaaagggagctatgttgacacatagaaatgttgtgtccaactgctcggccttcatc
aggatgacggaggtttcctgtccattgtcttgcagtgatgtccatatttccttcctgccc
ttggctcatatgtttgagagagtagtccagggagtgatgctagtgcatggagccaggatt
ggctttttccagggagacattcgcctgctgtcagatgacctgaacacactgaagcccact
gtgtttcctgtggttcctcgactgctgaacagaatgtatgataagatctttgggcaggcc
aacagctccctgaagcgctggctgctgggattcgcctacaggaggaaggaggcggagatg
aggagaggcatcgtgaggagagacagcatctgggatcaactcatcttccggaaggtccag
gccagcctcggaggtcgcgtgcgtctcatgctgacaggagctgctcccatctccccgact
gtcctcaccttcctcagagctgcaataggctgtcagttctatgaaggttacggacaaacc
gagtgtactgctggatgcaccatgaccatgcccggagaatggaacgcaggtcacgtcgga
gcccctctgccctgtaactccattaaactggtggacgtgcccgagatgaaatacctggct
gtaaatggggagggagaggtgtgtgtgaagggtcctaacgtgttccagggctacctgaaa
gacaccgagaagactgcggaggccattgatgcagatgggtggcttcacacgggagacatt
ggaaaatggcttcctaatggcacgctgcggatcgtggacaggaagaagcacatcttcaag
ctggcacagggagagtacatcgctcccgaaaagatagagaacatgtacatcaggagcgat
gctgtggcgcaggtctttgtgcatggagacagtctgcaggcatgtctggtagcagtggtg
gttcctgaccctgacttcctgtctagctgggccaagaggaccctgggactggagggcagc
taccgggagctatgtggcagagcggaagtcaaggcggccatcttggaggacatggtgcga
ttgggcaaggaaggaggcctcaagtccttcgagcaggtgaggtccatctacatccagacc
cagctgttctccatcgagaacggcctgctcactccaacgctgaaggccaagaggaacgaa
atgcggcagtacttcaaagcccagatcgacgagctgtacgctgggatcaaaatgtga
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