KEGG   Cyclopterus lumpus (lumpfish): 117737233
Entry
117737233         CDS       T09199                                 
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C
  KO
K05450  platelet derived growth factor C/D
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04010  MAPK signaling pathway
clum04020  Calcium signaling pathway
clum04510  Focal adhesion
clum04540  Gap junction
clum04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    117737233 (pdgfc)
   04020 Calcium signaling pathway
    117737233 (pdgfc)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117737233 (pdgfc)
   04540 Gap junction
    117737233 (pdgfc)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    117737233 (pdgfc)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:clum04052]
    117737233 (pdgfc)
Cytokines and neuropeptides [BR:clum04052]
 Cytokines
  Growth factors (RTK binding)
   117737233 (pdgfc)
SSDB
Motif
Pfam: CUB PDGF
Other DBs
NCBI-GeneID: 117737233
NCBI-ProteinID: XP_034398894
Ensembl: ENSCLMG00005009271
LinkDB
Position
10:complement(20713216..20754907)
AA seq 408 aa
FFLHKKKKEEKKKKRTDDTDYVDSTLPLPSPNVSETALVSRKRRTCVVIRTIPSTALCDR
PPPLIQMILPFIFLLASSLLQHYGSEAESSHVSKFQPPSVKEQNGVQDSHQEKIITVSGE
GMVHSPDFPHTYPRNTVLVWRLVATNNMRIQLAFDERFGLEDPEDGMCKYDFVEIEDPTE
NAVLGRWCGSQSAPASHTSKGSQIRIRFISDEYFPSEPGFCIRYSVLPVSVSGTEVPAVV
PPSQQGIEDLSEAVAGLGTVEEVMKYLEPERWQLDMEELYKPTWHVLGKSLILNKKARGL
DLNLLREEVRLYSCTPRNFSVSLREELKRTDAIFWPSCLLVKRCGGNCACCSHRCYDCQC
VPARVTKKYHEVLLLKHRTGVRGLQKSMADVPLEHHEECACVCKDDLD
NT seq 1227 nt   +upstreamnt  +downstreamnt
ttctttctccataaaaaaaaaaaagaagaaaaaaaaaaaaagaggactgatgatacagat
tatgtggattctactctgcctttaccctctccaaatgtgtccgaaacagcactggtgtcc
cgtaaacgacgcacgtgtgtggtgatacgaaccatcccgtcaacagcgctctgtgatcgc
ccaccgccactcatccaaatgatccttccattcatattccttcttgcttcatcgcttctc
caacattatggctcggaagccgaatcaagtcatgtcagcaaatttcaacccccaagtgta
aaggagcaaaacggagtgcaagattcccatcaggagaagatcatcacagtgtctggagag
ggaatggtccacagcccagacttcccacacacttatcccaggaatactgtgctggtctgg
agactcgtggcgaccaacaacatgaggatccagctcgcctttgacgagaggttcggtctg
gaggacccagaagatggcatgtgcaagtacgactttgtggagatagaggatccgactgag
aacgccgtcctgggtcgctggtgcgggtcacagtcggcaccagctagtcacacttctaaa
ggcagtcagatcaggatccgcttcatctctgatgagtacttcccctccgagccgggcttc
tgcatccgctactccgtcctccctgtgagtgtatcaggaaccgaagtccctgcggttgtc
cccccatcccagcagggtattgaggacttgtcagaggcggtggcagggctgggcaccgtg
gaggaggtcatgaagtacctggagccggagcgatggcagctggatatggaggagttgtac
aaacccacatggcatgtgctgggcaaatccttaatccttaataagaaggccagaggactt
gatctcaatctgttgagggaggaagttcgactgtacagctgcactccacgtaacttctct
gtgtccttgcgtgaggagctgaagaggacagatgccattttctggccgagctgcctcctg
gtgaagcgctgtggtggaaactgtgcctgctgctctcaccgctgctacgactgccagtgc
gttccagccagggtgaccaagaaataccacgaggtgctgctgctgaagcaccgaaccggc
gtcagaggcttgcagaagtccatggccgacgtgcccttggagcaccacgaggagtgcgcc
tgcgtgtgcaaagatgacttggactga

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