Cyclopterus lumpus (lumpfish): 117737233
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Entry
117737233 CDS
T09199
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C
KO
K05450
platelet derived growth factor C/D
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04020
Calcium signaling pathway
clum04510
Focal adhesion
clum04540
Gap junction
clum04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117737233 (pdgfc)
04020 Calcium signaling pathway
117737233 (pdgfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117737233 (pdgfc)
04540 Gap junction
117737233 (pdgfc)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117737233 (pdgfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
clum04052
]
117737233 (pdgfc)
Cytokines and neuropeptides [BR:
clum04052
]
Cytokines
Growth factors (RTK binding)
117737233 (pdgfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
117737233
NCBI-ProteinID:
XP_034398894
Ensembl:
ENSCLMG00005009271
LinkDB
All DBs
Position
10:complement(20713216..20754907)
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AA seq
408 aa
AA seq
DB search
FFLHKKKKEEKKKKRTDDTDYVDSTLPLPSPNVSETALVSRKRRTCVVIRTIPSTALCDR
PPPLIQMILPFIFLLASSLLQHYGSEAESSHVSKFQPPSVKEQNGVQDSHQEKIITVSGE
GMVHSPDFPHTYPRNTVLVWRLVATNNMRIQLAFDERFGLEDPEDGMCKYDFVEIEDPTE
NAVLGRWCGSQSAPASHTSKGSQIRIRFISDEYFPSEPGFCIRYSVLPVSVSGTEVPAVV
PPSQQGIEDLSEAVAGLGTVEEVMKYLEPERWQLDMEELYKPTWHVLGKSLILNKKARGL
DLNLLREEVRLYSCTPRNFSVSLREELKRTDAIFWPSCLLVKRCGGNCACCSHRCYDCQC
VPARVTKKYHEVLLLKHRTGVRGLQKSMADVPLEHHEECACVCKDDLD
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
ttctttctccataaaaaaaaaaaagaagaaaaaaaaaaaaagaggactgatgatacagat
tatgtggattctactctgcctttaccctctccaaatgtgtccgaaacagcactggtgtcc
cgtaaacgacgcacgtgtgtggtgatacgaaccatcccgtcaacagcgctctgtgatcgc
ccaccgccactcatccaaatgatccttccattcatattccttcttgcttcatcgcttctc
caacattatggctcggaagccgaatcaagtcatgtcagcaaatttcaacccccaagtgta
aaggagcaaaacggagtgcaagattcccatcaggagaagatcatcacagtgtctggagag
ggaatggtccacagcccagacttcccacacacttatcccaggaatactgtgctggtctgg
agactcgtggcgaccaacaacatgaggatccagctcgcctttgacgagaggttcggtctg
gaggacccagaagatggcatgtgcaagtacgactttgtggagatagaggatccgactgag
aacgccgtcctgggtcgctggtgcgggtcacagtcggcaccagctagtcacacttctaaa
ggcagtcagatcaggatccgcttcatctctgatgagtacttcccctccgagccgggcttc
tgcatccgctactccgtcctccctgtgagtgtatcaggaaccgaagtccctgcggttgtc
cccccatcccagcagggtattgaggacttgtcagaggcggtggcagggctgggcaccgtg
gaggaggtcatgaagtacctggagccggagcgatggcagctggatatggaggagttgtac
aaacccacatggcatgtgctgggcaaatccttaatccttaataagaaggccagaggactt
gatctcaatctgttgagggaggaagttcgactgtacagctgcactccacgtaacttctct
gtgtccttgcgtgaggagctgaagaggacagatgccattttctggccgagctgcctcctg
gtgaagcgctgtggtggaaactgtgcctgctgctctcaccgctgctacgactgccagtgc
gttccagccagggtgaccaagaaataccacgaggtgctgctgctgaagcaccgaaccggc
gtcagaggcttgcagaagtccatggccgacgtgcccttggagcaccacgaggagtgcgcc
tgcgtgtgcaaagatgacttggactga
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