Cyclopterus lumpus (lumpfish): 117737292
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Entry
117737292 CDS
T09199
Symbol
gabrb2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2a isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117737292 (gabrb2a)
04082 Neuroactive ligand signaling
117737292 (gabrb2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117737292 (gabrb2a)
Ion channels [BR:
clum04040
]
Ligand-gated channels
GABA-A
117737292 (gabrb2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
117737292
NCBI-ProteinID:
XP_034399014
Ensembl:
ENSCLMG00005021142
LinkDB
All DBs
Position
10:10957805..10985971
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AA seq
526 aa
AA seq
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MGRIRKNHFGIFTFSLLVTFVWAQSAKDLKDPSNMPLVKETVDRLMKGYDIRLRPDFGGA
PVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIAYNLTLDNRVADQLWVP
DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIEFYWRGGDGAVSGVDRIELPQFDIVDYKLISKNVVFSTGSYPRLSLSFKL
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPK
IPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGQGPQRQKKAAEKAATANNEKLRPDPN
KWLVGNVVQRDDALYARMKQREIDAYDSMWDPIFVDDAALGLGEQRNKMTPDDNILFSTL
EMKNEMGGGGDLSRGLGAPGDPRNTMLAYDSSTLQYRRAAMARQNYGHSALERHAQKKSR
LRRRASQLKVNIPDLSDVNSIDKWSRMIFPTVFSFFNVVYWLYYVH
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggggaggatcaggaaaaaccactttgggatttttactttttctttactcgtgactttt
gtctgggctcaaagcgccaaggatctcaaagatccgagcaatatgcctctggtaaaggaa
accgtggacagactgatgaaaggatacgacattcggttgaggccagatttcggaggtgcg
ccggtggcagtggggatgaatatagacatagccagcatagacatggtctctgaagtcaat
atggactacaccttgacgatgtacttccagcaagcatggcgggacaagcgtctctcctac
tctgagatagcatacaacctgactctggataaccgagtggcagatcagctgtgggtcccc
gacacctacttcctcaacgacaagaagtccttcgttcacggcgtcaccgtcaagaacaga
atgatccgtctccaccccgacggcacggtgctttatggactcaggatcaccacaacggca
gcctgtatgatggacctgcgccgctaccctctcgatgagcaaaactgcaccctggagatt
gaaagctatggctacaccacagatgatattgagttttactggcgtggtggcgacggagcc
gtgtccggggtcgacagaatagagctgcctcagttcgatattgttgactataaactcatc
tctaaaaatgtggtcttctctacaggttcctacccccgcctgtccctcagcttcaaacta
aagaggaacattggttacttcatcctgcagacatacatgccttccatcctgattaccatc
ctctcctgggtctccttctggatcaactacgacgcctcggctgccagagtggccctgggg
atcaccacggtgctgaccatgaccaccatcaacacccacttgcgagagacgctcccaaag
atcccctacgtgaaggctattgacatgtacctgatggggtgctttgtgtttgtcttcctg
gctctgctcgagtacgccttcgtcaactacatcttcttcggccagggcccccagcggcag
aagaaggcggctgagaaagcagccacggccaataacgagaagctgagacccgaccccaac
aagtggctggtgggaaatgtagttcagagagatgatgctctgtatgccagaatgaaacag
agggaaattgacgcatatgactcgatgtgggatcccatctttgtggacgatgccgcatta
ggactaggcgagcaaagaaataagatgactcctgacgacaacatcctgttcagcaccttg
gagatgaagaatgagatgggtggtggcggggatctgtcccggggcctcggagcacccgga
gacccccgcaacaccatgctggcctatgatagctcgacgctgcagtaccgcagggcagcc
atggctcgccagaactatggccacagcgccttggagcgccacgcccagaagaagtcgcgc
ctacggagacgggcttcccagctcaaggtgaatatcccagacctgtccgacgtgaactct
attgataagtggtccaggatgatcttccccaccgtcttctccttcttcaacgtcgtctac
tggctctactacgtccattaa
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