Cyclopterus lumpus (lumpfish): 117737315
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Entry
117737315 CDS
T09199
Symbol
cyfip2
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04810
Regulation of actin cytoskeleton
clum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117737315 (cyfip2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117737315 (cyfip2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117737315 (cyfip2)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117737315 (cyfip2)
Factors involved in mRNA localization
Other mRNA localization factors
117737315 (cyfip2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
117737315
NCBI-ProteinID:
XP_034399075
Ensembl:
ENSCLMG00005021130
LinkDB
All DBs
Position
10:complement(8110246..8129128)
Genome browser
AA seq
1277 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQVHKHKHKHKHKHKHKHTSFTL
FSLPLQANFDTNFEDRNAFVTGIARYIEQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAI
PQVKCNEQPNRVEIYEKTVEVLEPEVTKLMKFMYFQRKAIERFCSEVKRLCHAERRKDFV
SEAYLLTLGKFINMFAVLDELKNMKCSVKNDHSAYKRAAQFLRKMADPQSIQESQNLSMF
LANHNRITQCLQQQLEVIPGYEELLADIVNICVDYYENKMYLTPSEKHMLLKVMGFGLYL
MDGNVSNIYKLDAKKRINLSKIDKFFKVVPLFGDMQIELSRYIETSAHYEENKSKWTCTQ
SSISPQYNLCEQMVQIREDHIRFISELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRG
LQLLSKWSTHVMEVYSWKLVHPTDKFCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAM
IKGLQVLMGRMESVFNQAIRNTIYAALQDFAQMTLREPLRQAVRKKKNVLISVLQAIRKT
VCDWDGVREPPNDPCLRGEKDPKGGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSK
KTLRSCLDGPIVVAIEDFHKHSFFFTHLLNFSEALQQCCDLSQLWFREFFLELTMGRRIQ
FPIEMSMPWILTDHILETKEPSMMEYVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNL
CFDQFVYKLADQIFAYYKAMAGSVLLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQL
LGRSIDLNRLITQRISAAMYKSLDHAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMT
LDSFDAMFREANHNVSAPYGRITLHVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQR
DKPANVQPYYLYGSKPLNIAYSHIYSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIV
KSLLQGTILQYVKTLIEVMPKICRLPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSL
REVGNAILFCLLIEQALSQEEVCDLLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPL
HLVPLIERLGTPQQIAIAREGDLLTKERLCCGLSMFEVILTRIRSFLQDGVWRGPPPTNG
VMHVDECMEFHRLWSAMQFVYCIPVGTHEFTAEQCFGDGLNWAGCAIIVLLGQQRRFDLF
DFCYHLLKVQRQDGKDEIIKNVPLKKMADRIRKYQILNNEIFAILNKYMKAVETDSSTVE
HVRCFQPPIHQSLATTC
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccacgtgaccctggaggatgccctgtccaatgtggacctgctggaggagctg
cctctcccggaccagcagccatgcatcgagccccctccctcctctatcatgtaccaggta
cacaaacacaaacacaaacacaaacacaaacacaaacacaaacacacgtctttcactctt
ttctccctccctctgcaggcgaactttgacaccaacttcgaggacaggaatgcatttgtg
accggcatcgcccgttatatagagcaagctacagtccactccagcatgaatgagatgctg
gaggaaggacatgagtatgctgtgatgctttacacctggaggagctgctccagagccatt
ccccaggtgaaatgcaacgagcagcccaacagagtcgagatctatgagaaaacggtggag
gtgttggaacctgaagtcaccaagctcatgaagttcatgtacttccagcggaaagccatc
gaacgtttctgtagcgaagtgaagcgcctgtgtcacgccgagagaaggaaggactttgtg
tctgaggcctacctgctcactctgggcaaatttatcaacatgtttgcggtgctggacgaa
ctgaagaacatgaagtgcagcgtcaagaacgatcactcggcctacaaaagggctgctcaa
ttcttgaggaagatggccgaccctcagtccatccaggagtcccagaacctctccatgttt
ttagccaaccacaacaggatcacgcagtgcctgcaacaacagttggaggtgattcctggc
tacgaggagcttctggcagacattgtcaacatctgtgtggactattacgagaacaagatg
tatttgacacccagcgagaaacacatgctgcttaaggtgatgggcttcgggctgtacctg
atggatgggaacgtgagtaatatctataaactggatgccaaaaagaggatcaacctgagc
aagatcgacaagttcttcaaagtggtgccactattcggagacatgcagatcgagttgtct
cgctacattgagacaagtgcccactacgaagaaaacaagtccaagtggacgtgcacccag
agcagcatctcgccacagtacaacctgtgcgagcagatggtgcagatcagggaggaccac
atccgcttcatctcggagctggcgcgctacagcaacagcgaggtggtgacgggctcgggc
ctggacagccagaagtctgacgaggagtaccgagagctgttcgacctcgctctgaggggt
ctgcagctgctgtccaagtggagcacgcacgtcatggaagtttactcttggaagctggtc
catcccacggataaattctgcaacaaggactgtccaggcacagcggaggagtacgaacgg
gccacgcggtacaattacaccagcgaggagaagttcgccctggtggaggtcattgccatg
atcaaagggctgcaggttctgatgggccggatggagtcggtgtttaaccaggccatcagg
aataccatctatgcagcgctgcaggactttgcccagatgaccctcagggagcctctgcgc
caggctgtacgcaagaagaagaacgtcctcattagtgttcttcaggccattcgtaagact
gtgtgtgactgggatggggtgagggaacccccaaatgacccctgcctgaggggcgagaag
gacccaaaaggtggatttgacatcaaagtgccccgcagggctgtcggaccctccagcaca
cagctgtacatggtgcgcaccatgctggaatcattgatagcggataagagcggatctaag
aagactctccgcagctgcctggacggacccatagtggtggccatcgaagacttccacaaa
cattccttcttcttcacacacctgctcaacttcagcgaggccctgcagcagtgctgcgac
ctgtcccagctgtggttcagagagttcttcctggagctcaccatgggtcgcaggatccag
ttccccattgagatgtccatgccctggatcctcaccgaccacatcctggagaccaaggag
ccctccatgatggaatatgtgctgtatcctctggacctgtacaacgacagtggctactac
gctctcaccaagttcaagaagcagttcctttatgacgaaatcgaggccgaggtaaacctc
tgctttgaccagtttgtctacaagttagcggatcagatatttgcctactacaaagcaatg
gctggaagcgtcctcctagacaagcgcttcagggcagagtgtaaaaactatggcgtgatc
atcccgtacccgccatcaaaccgctacgagacgctgctcaaacagagacacgtgcagctg
ctaggtcgctctattgacctgaaccgtctgatcacccagaggatctcggcagcgatgtac
aagtccctggaccacgccatcagccgcttcgagagcgaggacctcacttccatagtggag
ctggagtggctgctggagatcaacagactaacccaccggctcctgtgcaagcacatgacc
ctggacagcttcgacgccatgttccgcgaggccaaccacaacgtctccgctccctacggg
cgaatcactctccacgtcttctgggagctcaacttcgatttcctgcccaactactgctac
aacggatccaccaaccgctttgtacgtacggccattcccttcacccaggagcctcaaaga
gacaagccagctaacgtgcagccttactacctgtatgggtccaagcctctgaacattgcc
tactcccacatatacagctcctacagaaactttgtgggcccgccccacttcaagaccatc
tgccgtctccttggttaccaaggcatcgctgtggtgatggaggagctgctcaagattgtc
aagagcctgttacagggcaccatcctgcagtacgtgaaaaccctgatcgaagtcatgccc
aagatctgccgccttccgcgccacgagtatggctctccaggtatcttggagttcttccac
catcagctcaaggatatcattgaatatgctgagctgaagacagacgtgttccagagcttg
agggaggtggggaatgccatcctcttctgcctgctcatcgagcaagctctgtcccaggag
gaagtgtgtgacctgcttcatgccgcccccttccagaacattctgcccagagtctacatc
aaagagggcgagcgtctggaggtgaggatgaaaaggctggaagccaagtacgcccctctc
cacctcgtgcctctaattgagaggttgggaaccccacagcaaattgccatcgcccgtgag
ggggacctgctgaccaaggagcgcctgtgctgcggcctttccatgttcgaggtcatcctg
acgcgcatccgcagcttcttgcaggatggggtgtggcgcggccctccgcccaccaacggc
gtcatgcatgttgacgagtgtatggagttccaccgcttgtggagcgccatgcagtttgtc
tactgcatccctgtgggcacacatgagtttactgcagagcagtgcttcggcgatgggctg
aactgggccggctgtgccatcattgtgctgttgggacagcagcgccgctttgacctcttt
gacttctgctaccatctgctcaaagtccaaagacaggacggcaaggatgagatcatcaag
aatgtgcccctgaagaagatggcagaccgcatcaggaagtaccagatcctcaacaatgag
atctttgccatcctcaacaagtacatgaaggcggtggagacggacagttccactgtggag
cacgttcgctgtttccaacctcctatacaccaatctctggctaccacctgttga
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integrated database retrieval system
