Cyclopterus lumpus (lumpfish): 117737316
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Entry
117737316 CDS
T09199
Symbol
stx3a
Name
(RefSeq) syntaxin-3a isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117737316 (stx3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117737316 (stx3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117737316 (stx3a)
Membrane trafficking [BR:
clum04131
]
SNARE
Syntaxin (Qa)
Stx-PM
117737316 (stx3a)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117737316 (stx3a)
Exosomal proteins of other body fluids (saliva and urine)
117737316 (stx3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
DUF3040
PI_PP_C
ETRAMP
Relaxase_C
Prominin
YtxH
DUF1687
Psg1
FlaC_arch
ArAE_1_C
DUF6480
Baculo_PEP_C
DUF6584
Med11
DUF6827
Motif
Other DBs
NCBI-GeneID:
117737316
NCBI-ProteinID:
XP_034399077
Ensembl:
ENSCLMG00005010497
UniProt:
A0A8C2Z580
LinkDB
All DBs
Position
10:13803568..13818442
Genome browser
AA seq
289 aa
AA seq
DB search
MKDRLEQLKATCDQDDDEVEIAMDNAAFMDEFFCQIEDIRSSIDKIDENVAEVKKLFSVI
LSAPTSDQKTQDDLEAITNDIKKMANNARNKLKTIERNLESEEQERVSADIRIRKSQHAV
LSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGQATTDDELEEMLESGNSAVFTAGIV
DAGISKQALSEIEARHKDIVRLESSIKELHDMFVDIAMLVENQGDIVDNIEQNVSKSVDH
ITVAKEQTKKAIRHRTKARKKMVIIVVVVVVLLALLALIIGLSVGLKQR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgattggaacaacttaaagcgacgtgtgatcaagatgatgacgaggtggag
attgctatggacaatgcggccttcatggacgaattcttctgtcagattgaggacatcagg
agcagtattgataaaattgatgagaatgtggctgaagtcaaaaagcttttctccgtcatc
ttgtctgctcccacatcagatcagaaaacccaggatgacttggaggcaatcaccaacgac
ataaagaagatggctaacaatgcaagaaacaaactcaagaccatcgagaggaatctggag
tcagaggagcaggagagggtgtctgctgacatccggatacgtaaatcacagcatgcagtc
ctgtccaggaaatttgtggaggtaatgacaaagtataatgaagctcaggtggacttcagg
gagaggagtaaaggacgtattcagagacaactagagatcactggacaagcaacaacagat
gatgaacttgaagagatgttggaaagtggcaattctgctgtgtttacggcagggattgtg
gacgctgggatctcaaaacaagctctaagtgagattgaagccagacacaaagacattgtc
cgtctggaaagtagcatcaaggagctgcacgatatgtttgtagacatcgccatgcttgtg
gagaaccagggtgacatagttgacaacatagagcagaatgtatccaagtcagtggaccat
atcacagtggctaaggaacagaccaaaaaagctataaggcatcggaccaaagcccgcaag
aaaatggtgataatagtggtggttgtggtggtcttgctggccttactagctctcataatc
gggttgtctgtgggattgaagcaaaggtga
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