Cyclopterus lumpus (lumpfish): 117737317
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Entry
117737317 CDS
T09199
Symbol
etf1a
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1 isoform X1
KO
K03265
peptide chain release factor subunit 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117737317 (etf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117737317 (etf1a)
03012 Translation factors [BR:
clum03012
]
117737317 (etf1a)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117737317 (etf1a)
Translation factors [BR:
clum03012
]
Eukaryotic type
Release factors
117737317 (etf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
117737317
NCBI-ProteinID:
XP_034399079
Ensembl:
ENSCLMG00005017288
UniProt:
A0A8C3A4X7
LinkDB
All DBs
Position
10:12532441..12538747
Genome browser
AA seq
443 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYILRVHGAESNGLENDEKTLYLTPEQEKDK
SHFTDKETGQEHELLESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILR
YRVDFQGMEYQGEDDEFFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccagcgcggcagacaggaacgtggagatatggaaaatcaagaagctg
atcaaaagtttggaagctgcccgtgggaatggcaccagtatgatctcactaatcatccct
cccaaggaccagatatctagagtggccaagatgctggctgatgagtttggcacagcttcc
aacattaagagcagagtcaacagactctctgtactcggggccatcacctctgtacaacaa
agactaaaactctacaacaaggtgccacccaatggtttggttgtctattgtggcaccatt
gtgacagacgaaggcaaggagaagaaagtaaatattgactttgagccttttaagccaatt
aacacctccctttacctctgcgacaacaagttccacacagaggcattgacagccctgctc
tccgatgacagtaaatttggctttattgtgatcgatggtagtggggcactgtttggcaca
ctgcagggcaacaccagagaggtgctgcacaagttcactgtggacctacccaagaagcac
gggagaggaggacagtctgctctacgttttgctcgtctcagaatggaaaagagacacaac
tatgtgagaaaggtggcagagacagcggtccagctctttgtatccaacgacaaagttaat
gtggcaggaatggtcttggctggctctgctgacttcaagaccgagctcagccagtcggac
atgttcgaccctaggttacaggccaaggttttaaagctggtggacatctcctatggagga
gagaatggtttcaaccaggccattgagctctcggcagaggtcctctctaatgtcaagttc
atccaggagaagaagcttataggacggtacttcgatgagatcagccaggacacggggaag
tactgttttggtgtggaggacacactcaaagccctggagatgggagcagtggagatcctc
atagtctacgaaaacttagacaccatgcgttacattttacgtgtacatggggcagagagc
aacggattagagaacgatgagaagactttgtacttgacaccagagcaggagaaagacaag
tctcacttcacagacaaggagacgggacaagaacatgagctactcgagagcatgcctctg
ctggagtggtttgctaacaactacaagaaatttggagctacgctggagatagtcacagac
aagagccaggaagggtcccagttcgtcaagggctttggaggcattgggggtatcttgcgg
tacagggtggatttccagggcatggagtaccaaggagaggacgatgagttctttgatttg
gatgactactag
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integrated database retrieval system
