Cyclopterus lumpus (lumpfish): 117737333
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Entry
117737333 CDS
T09199
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117737333 (gabra4)
04082 Neuroactive ligand signaling
117737333 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117737333 (gabra4)
Ion channels [BR:
clum04040
]
Ligand-gated channels
GABA-A
117737333 (gabra4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Hmw_CFAP97
Motif
Other DBs
NCBI-GeneID:
117737333
NCBI-ProteinID:
XP_034399119
Ensembl:
ENSCLMG00005018376
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All DBs
Position
10:6088158..6102786
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AA seq
557 aa
AA seq
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MVSAQKKKETATAMWPASIRTLLYFLCLATCVKKISGQTKKDERIYPENFTRILDRLLDG
YDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLMYEGPIEILR
LNNLMVTKVWTPDTFFRNGKKSVAHNMTAPNKLFRIMKNGTILYTMRLTISAQCPMKLVN
FPMDGHACPLKFGSYAYPKTEIIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETIKS
ITGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT
MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQMERAKKKPAKC
PPVPQTTPVKVKDTGEVLQQIPDSNGNLRKRMNYISHQEASSHQRAMSTTNISGVGRARV
LRPLAGGVNGSSTPLSRSSPKSESLLSVASSSDQLVKSVPQAAASTPDVMAATPCKQNAS
SSSLQHLLGPKLERIQMMGNKLELKQTPCSQPTTAGMGGTSKIDKYARILFPVSFGAFNM
VYWVVYLSKDTMVATGG
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgcccagaagaagaaggagacggcgacagcgatgtggcccgcgtctattcgg
accctcctctactttttgtgtttggcgacttgtgtgaagaaaatctctggacagacaaaa
aaggatgaacggatctatccggagaattttactcgcattctggaccgacttctggacggc
tatgacaacaggctgcgaccgggattcgggggacctgtgacggaggtcaagacggacatt
tatgtgaccagttttgggccggtctcagatgttgaaatggagtacacaatggacgtgttc
tttcggcagacgtgggtggaccggagactgatgtacgagggacccatagagattctgcgg
ctgaacaacctgatggtgaccaaagtgtggacgccggacaccttcttcaggaacggcaag
aagtctgtggctcacaacatgacggcccccaacaagctgttccgcatcatgaagaatggc
accatcctgtacaccatgaggttgaccatcagtgcccagtgtcccatgaagcttgtgaac
ttccccatggatggacatgcgtgccccctcaagtttggaagctatgcctatccaaaaaca
gagatcatttacacgtggaccaaagggcctcagcattcagtggaggtccctcctgagtcc
tccagcctcgttcagtatgatctcatcggacagacggtctccagcgaaacgatcaaatcc
atcacaggtgaatatgtggtgatgacggtctactttcacttgaaacgtaaaatgggctac
ttcatgattcagacgtatatcccctgcataatgacagtcatcctctcccaagtgtccttc
tggataaataaggaatcggtcccggcacgcacagtcttcggcatcaccaccgtcctcacc
atgacaacactcagtatcagcgcccgccactcccttcccaaggtctcctacgccaccgcc
atggactggttcatcgccgtctgcttcgccttcgtcttctccgccctcatcgagtttgcc
gccgtgaactacttcaccaacgcgcagatggagcgcgccaagaagaagccggccaagtgt
cccccggtgccccaaaccacgcctgtcaaggtcaaggacacgggggaagtgctgcagcag
attcccgacagcaacggcaacttgagaaagcggatgaattatatctcccaccaagaggcc
agcagtcaccagagagccatgtccaccaccaacatttcgggggttggccgagcgagagtg
ctgcgacctttggccggcggggtcaacggcagctccacccccctctcgcgctccagcccc
aagtccgagagcttgctcagcgtggcctcctcctcggaccagctggtgaagagcgtgccg
caggctgcggcgtccacgccggacgtgatggcggcgacgccatgcaagcagaacgccagc
tcctcgtccctgcagcatctgctggggcccaagctggagcgcatccagatgatggggaac
aagctggagctgaagcagacgccgtgctcccagcccactaccgccggcatgggaggaacc
agcaaaattgacaagtacgctcggatcctgttccccgtgtccttcggggcgtttaacatg
gtctactgggtggtttacctatcaaaggacacgatggtggctacaggtggctag
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