Cyclopterus lumpus (lumpfish): 117737350
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Entry
117737350 CDS
T09199
Symbol
ppp2r2ba
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03015
mRNA surveillance pathway
clum04261
Adrenergic signaling in cardiomyocytes
clum04382
Cornified envelope formation
clum04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117737350 (ppp2r2ba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117737350 (ppp2r2ba)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117737350 (ppp2r2ba)
09158 Development and regeneration
04382 Cornified envelope formation
117737350 (ppp2r2ba)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117737350 (ppp2r2ba)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117737350 (ppp2r2ba)
03036 Chromosome and associated proteins [BR:
clum03036
]
117737350 (ppp2r2ba)
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117737350 (ppp2r2ba)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117737350 (ppp2r2ba)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117737350 (ppp2r2ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
117737350
NCBI-ProteinID:
XP_034399154
Ensembl:
ENSCLMG00005021711
LinkDB
All DBs
Position
10:complement(8633634..8671032)
Genome browser
AA seq
446 aa
AA seq
DB search
MKCFSRYLPYLFRPPSTILSSTCHTEADIISTVEFNSSGELLATGDKGGRVVVFQREQES
KSQPQRRGEYNVYSTFRATSQSFDYLKGLEIEEKINKIKWLPQQNAAYFLLSTNDKTVKL
WKISERDKRPEGYNQKDDDGRIRDPSTITSLRVPVLQPMDLMVEATARRVFSNAHTDHIN
SISVNSDLQTYISTDDLRVNLWNLEITDHSFNIVDIKPANMEELTEVITSAEFHPQQCHT
FAYSSSKGSIRLCDMREAALCDKHCKYFEEPEDPSTRSFFSEIISSISDVKFSHNGRYLM
TRDYLTVKVWDLQMENKPIETYQVHDYLRGKLCSLYENDCIFDKFECVWNGSDSVIMTGS
YNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILH
TTWHPHENIIAVAATNNLYIFQDKVN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtttttcccgttatctcccgtacctcttccgccctccgagcaccatcctgtcc
tccacttgccacaccgaagctgacattatctcaacggttgagtttaactcatcgggggag
ctgttggccaccggggataaaggaggcagagtggttgtctttcagagggagcaggagagt
aagagccagccccagcgtcgaggggagtacaatgtttacagcacattcagagccacgagc
cagagttttgactacctgaagggtttggagattgaggagaagatcaacaagatcaaatgg
cttcctcagcagaacgccgcctacttcctgctctccacaaacgacaagacagtgaagctg
tggaaaatcagcgagagagacaagcgtccggagggctacaaccagaaggatgacgatgga
cggatcagagacccgtcgacaatcacctcgctacgggtgccggtgctgcagcctatggac
ttgatggttgaggctacagcgaggcgagtattcagcaatgctcacactgaccacatcaac
tccatctctgtcaactccgatcttcagacatacatctccaccgacgacctcagggtgaac
ctgtggaacctggagatcaccgatcacagcttcaacattgtggacatcaagccagccaac
atggaggaactgacggaggtgatcacctcagcagagtttcatccccagcagtgtcacacc
tttgcctacagcagcagcaagggctcaatacgcctctgtgacatgagagaggctgcgctc
tgcgacaaacactgcaaatactttgaagagcccgaggatccctccactcgctcctttttc
tctgaaatcatctcatccatctctgacgtgaagttcagccacaacgggcgctacctgatg
acaagagactacctcactgtcaaggtgtgggaccttcaaatggagaacaaaccaatagag
acataccaggtgcatgactacttacgtggcaaactctgttctctgtatgagaatgactgc
atcttcgacaagtttgagtgtgtctggaacggctcagatagcgtcataatgaccggctcc
tataacaatttcttccgaatgtttgaccggaacactaaacgggacgtcacactggaggcg
tccagggagaatagcaaacccagagccattctgaagcctcgcaaggtgtgtgtgggtggg
aagcgccgtaaggatgagattagtgtagacagcctcgacttcagcaagaagatccttcac
actacatggcacccgcatgagaacatcatcgcagtagcggccaccaacaacctctacatc
ttccaagacaaggtcaactaa
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