Cyclopterus lumpus (lumpfish): 117737419
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Entry
117737419 CDS
T09199
Symbol
gria1a
Name
(RefSeq) glutamate receptor 1a
KO
K05197
glutamate receptor 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117737419 (gria1a)
04082 Neuroactive ligand signaling
117737419 (gria1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117737419 (gria1a)
Ion channels [BR:
clum04040
]
Ligand-gated channels
Glutamate (ionotropic)
117737419 (gria1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
117737419
NCBI-ProteinID:
XP_034399267
Ensembl:
ENSCLMG00005021575
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All DBs
Position
10:complement(8176329..8238817)
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AA seq
920 aa
AA seq
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MQRSLTILYTSLLGVCLGSSSSFPSNINIGGLFPTESHEYEVFRFALSHHQDIPKLVPQV
DMVKMGNSFSMTYAFCSQFSKGVYAIIGLYDRKTVNMLMSFCGALHVCFVTPSFPIETAN
QFVIQLRPEVQYALVGVIDHYGWTKFVYMYSSDSGLSVLQKVLDTAAEKNWQVTSVNVET
MTEASFLKVFQDLDKRKEGQIIIDCETERLTGILRKIVEQGKNAKSYHYILANLGFLDID
LTDLRKGGANITGFQLVNNSEPSVSRVVHQWMEFDNKDSKVPKSGLKYTGALTYDGVKVM
FTAFQNLRKQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVRIDGLTGHIQFNEKGR
RTNYTVSVMELAPSGPKKVGYWNEDEKYVTTASLVRGSNETYGLQNRTYIVTTILESPYV
MLKKNHEQLVGNDKYEGYIVELAAEIAKHVSYQYKLKVVSDGKYGASDPETKMWNGMVGE
LVYGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIW
MCIVFAYIGVSVVLFLVSRFSPYEWHAEDYEEGGEPQSPTQASASNGVQQGQAPTQQNIN
QQSAEQTNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLA
AFLTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFRRSKIAVFEKMWSYMKAADPSV
FVKTTDEGMMRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSP
LRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIG
GLGLAMLVALVEFCYKSRTESRRMKQSINDAMRCSTLTRMSGNGSGGENGRILTHDFPKS
VQTLPCMSHTASMGLGASGM
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaagcctcaccattctctacaccagtttactgggggtgtgcttgggatcgagc
tcaagtttcccaagtaacatcaatataggaggcttgttcccaaccgaatcgcacgaatat
gaggtgtttcgtttcgccctctcgcaccaccaggacatccccaaactggtgccgcaggtg
gatatggtcaagatggggaatagcttctccatgacatatgccttttgctcccagttctcc
aaaggcgtgtacgccatcatcggcctgtacgacaggaagacggtcaacatgctcatgtcc
ttctgcggcgcgctgcacgtctgcttcgtcacgccgtccttccccatcgagacggccaac
cagttcgtcatccagctgaggcccgaggtccagtacgctctggtgggagtgatcgaccac
tacggatggaccaagtttgtctacatgtacagctctgactcaggcctgtcggtgctgcag
aaggttctggacacagcagcggagaagaactggcaggtgacgtcggtcaatgtggagacc
atgacggaggcctccttcttgaaagtgttccaggatttggacaagaggaaggagggccag
attatcatcgattgtgagaccgagaggctcactggcatcctcagaaagattgttgaacaa
ggcaagaatgcaaagagctaccactacatcctggctaacctgggcttcctggacattgac
ctgacagacctgaggaagggtggcgcgaacatcaccggcttccagctcgtcaacaactct
gagcccagcgtcagccgcgtcgtccaccagtggatggagtttgacaacaaagactccaaa
gtgcccaagagtggactcaaatacactggcgctctcacatatgacggggtgaaagtcatg
ttcacggcctttcagaacttaaggaagcagaggatagacatctctcgcaggggcaacgct
ggagagtgtcttgccaacccaccagccccctgggggcagggcatagacatccagagagcc
ctgcagcaggtccgtatagatggactgacgggtcacatccagttcaacgagaaaggtcgc
agaaccaactacactgtcagcgtcatggaactggccccctctggaccaaagaaggttggc
tactggaacgaagatgagaagtacgtgacgactgccagcttggtgagaggcagcaacgag
acgtacggcctgcagaacagaacttacatcgtcaccacgatcttggagtctccatatgtg
atgctgaagaagaaccacgagcaacttgtgggaaatgacaagtacgagggctacatcgtc
gagctggctgcagagatagccaaacatgtgagctaccagtacaagctgaaggttgtttca
gacggcaaatatggagcaagcgatccggagaccaagatgtggaacggcatggtgggagaa
ctggtgtatgggaaagctgatgtggctgtggctcctctgaccatcaccctagttcgtgaa
gaagtgatcgacttctcgaagcccttcatgtccctgggtatctccatcatgatcaagaaa
cccacaaaatccaaaccgggcgtgttctccttcctggacccgctggcttacgagatctgg
atgtgcattgtgttcgcctacatcggtgtcagcgtcgtgctgttcctcgtcagccgcttc
agcccgtatgagtggcacgccgaggactacgaggaggggggtgagccgcagtctcccacc
caagcctcggcctccaatggggtgcaacagggccaggcgccgacgcaacagaacatcaac
cagcagagtgctgagcagaccaatgagtttggcattttcaactccctttggttctcactg
ggggccttcatgcagcagggctgcgatatctcaccacgctccctgtccggccgcatcgtt
ggaggcgtctggtggttcttcaccctcatcatcatctcatcctacactgccaacttggct
gccttcctgaccgtcgagaggatggtgtctcctatagagagcgctgaggacttggccaag
cagacggagatcgcctatggaaccctggatgccggctccaccaaagaattcttcaggagg
tcgaagatcgccgtgtttgagaagatgtggtcctacatgaaggcggccgacccgtccgtg
ttcgtcaagaccacggacgagggcatgatgagagtcaggaagtccaagggcaagtatgcc
tacctgttggagtccacaatgaacgagtacatagagcagaggaaaccgtgcgatactatg
aaggtgggaggaaacctggactctaaaggttatggcatcgccacgcccaagggctcccct
ctcagaaacccagtaaacctggcagtgttaaaactgaacgagcagggcctcttggacaaa
ttgaaaaacaagtggtggtacgacaagggagagtgcggcagcgggggcggggactccaag
gacaagacgagcgctctgagcctcagcaatgtggcgggagtcttctacatcctgatcggc
ggcctgggcctggccatgctggtggcgctggtggagttctgctacaagtccaggaccgag
tcgcgccgaatgaagcaatccatcaacgacgccatgcgctgctccaccctgaccaggatg
agtggcaacgggagcggcggagagaacgggcgaatcctcacccacgacttccccaagtcc
gttcagacgctgccctgcatgagccacaccgccagcatgggactgggtgcctccggcatg
tga
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