Cyclopterus lumpus (lumpfish): 117737486
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Entry
117737486 CDS
T09199
Symbol
slitrk2
Name
(RefSeq) SLIT and NTRK-like protein 2
KO
K25833
SLIT and NTRK-like protein 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117737486 (slitrk2)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRRCT
LRRNT
MCLC
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
117737486
NCBI-ProteinID:
XP_034399378
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Position
10:complement(900561..903215)
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AA seq
884 aa
AA seq
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MLSGVLLLSVLTVTSLSPSETESRKTSAYKEICNTRCACEERENILNINCENKGFTTVSQ
FQAPPNKISQLFLNGNFLSRLSANEFVNYGNVTSLHLGNNGLQEIRTGAFNGLRFLKRLH
LNNNNLEVIKEDTFAGLESLEYLQADYNYISAIEPGAFSKLNKLKVLILNDNLLLSLPPN
IFRFVLLTHLDLRGNRLKILPFAGVLEHIGGIMEIQLEENPWNCTCDLIPLKSWLDTISV
FVGDIVCETPFRLHGKDITQLIKQDLCPRRNAGERVHPASDSHFQGALPATYHPGMITPT
RAPKASRPPKMRYRTTPRITKDKHVFGPIMVYQTRSPVPMLCPTVCVCTSQNPDSGLNIN
CQERKLHNISELNPKPTYPKKLHLTGNYLQVIYRTDLTEYSSLELLHLGNNRIAVIQEGA
FENLTNLRRLYLNGNYIESLTQSLFAGLQSLQYLYLEYNIIKDILPQTFNSLHNLQLLFL
NNNLLRSLPDNVFGGTMLTRLNLRNNHFSYLAVRGVLDQLSAFIQIDLQENPWDCTCYIV
ALKNWMELSSTSVVVNEITCDSPSKHAGRLLRSLRNEAICPDPSEVPPPQHAPPTKAPTL
ISPGTEATTPSSSSFSSVSPTESRIHTPELHPEVPLSVLILGLLVVFILSVCFGAGLFVF
VLKRRKGVEHVPTGANNLDLNSFQVQYGSYTPEPTQDKTTESHIYNYIPPPVGSMCQNPI
YMQKDGEQVAYYRNLKELSFGLLDAKKDVLNRSPGAYTISTMDFMDTSPTSCSLATSEPP
EMLYQNLGERPHKELPTAAGAPFHYNFCTLPKRPCIVPPYEAATARRHITNQDRLNKTVL
YPRKYYGAEHPSKNNEHPLLLPGKLKTEPDYLEVLEKQTTMSQL
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcggcgtcctcttactgagcgtcctcacggtcaccagcctttcaccatctgaa
acggagagccgcaaaacttcagcctacaaagagatctgcaatactcgctgcgcctgtgag
gagcgggagaacattctaaacatcaactgtgagaataaaggatttacaacagtcagtcag
ttccaggcaccaccaaataaaatctctcagctttttctaaatggaaacttcctgtcacgg
ctcagtgccaatgagtttgttaattatggcaacgtcacctcactgcatctggggaataac
ggcttgcaggagatccgaaccggcgctttcaacgggctgcgcttcctgaagcggctccac
ttgaacaacaacaacctggaggtgattaaagaggacacctttgcgggattggagagtttg
gagtatttgcaggcagactataattatatcagcgccatagagccgggtgcttttagtaag
ctgaataagctcaaagtgttgatcctaaatgacaacctgctgttgtctttgccgcccaac
attttccgcttcgtgctcctcacccacttggatttacgtggcaaccggctcaagatcttg
ccgtttgccggggttttagagcacataggcggcatcatggagatccagctggaggagaat
ccgtggaattgcacctgtgatctgattccgcttaaatcctggttggacactatttctgtc
ttcgtgggggacatcgtgtgtgagacgccgttcaggctgcacggtaaagacatcacgcag
ctcataaagcaggatctgtgccctcgcaggaatgctggggagcgcgttcaccccgcctcc
gactctcactttcaaggggccctccccgcaacctaccaccccggcatgatcacacccacc
cgtgccccgaaagcttctcgtccgcccaaaatgcgctacaggaccaccccacgcatcaca
aaggacaaacacgtctttgggcctataatggtttaccagacacgctcccctgtgcccatg
ttatgtcccactgtgtgcgtgtgcacgtcacaaaaccctgacagcggattgaacatcaat
tgccaagagcgaaagttgcacaacatcagtgagctgaaccccaagcccacctacccaaag
aaactccacctgaccggtaactacttacaagtgatttacagaactgatctcactgagtac
agttcactggagctgcttcatttaggaaataataggatagcagtgattcaggaaggtgca
tttgagaatctaaccaacctcagacggctctatttgaatgggaattacattgaatcactt
actcaatccctcttcgctggcctgcagtcgctccagtatctgtatttggaatataacatc
attaaagacattttaccacaaacatttaactctctgcataaccttcagctgctttttctg
aacaacaaccttttaagatcactccctgacaatgttttcgggggcaccatgctaacacga
cttaacttgaggaataatcatttttcctaccttgcagtccgaggggttctagaccagctt
tcagcatttatccagatcgacctgcaggagaacccctgggactgcacctgttatattgtt
gcactcaagaactggatggagctgtccagtaccagcgtagtggttaacgaaattacgtgt
gattcgccctctaaacatgcaggtcgcctgctgcgctcacttcgcaatgaggccatctgc
cccgatcccagcgaggtgcccccgccacaacatgcaccccctaccaaagcccccacctta
ataagccctggcaccgaagccaccacaccttcctcttcttcttttagctcagttagcccc
actgaatcccgaatccacactccagagttacaccctgaggtcccactttcagtcctgatt
cttggacttcttgttgttttcatcctctcggtctgctttggtgcaggcctctttgttttt
gttctgaaacggcgcaaaggagtggaacatgtccccacaggtgctaacaacttagatctc
aactctttccaagtgcaatatggctcctacactcctgaaccaacccaagacaaaaccact
gaaagccacatttataactatatccctccacctgtgggctctatgtgccaaaaccctatt
tacatgcagaaggatggcgaacaggtggcgtattaccgcaacctgaaggagctcagcttt
gggctcctggacgcaaagaaggatgtgctcaaccgcagcccaggagcctacaccatcagc
acaatggattttatggatacatctccaacatcatgtagtttggccacctcagaacctcct
gagatgttgtatcaaaatttaggggagaggccccacaaagagcttcccacggctgcaggc
gcccctttccattacaacttttgcactttacctaagagaccttgcatcgtgcccccctat
gaggccgctacagcccggcggcacatcaccaaccaggacaggttgaacaaaactgtactg
tacccgaggaaatactacggggctgaacacccttcgaaaaacaatgagcacccgcttctg
ctccctgggaagctaaaaacagaaccagactacctggaggttctggagaaacagacaacg
atgagtcaactgtaa
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