Cyclopterus lumpus (lumpfish): 117737540
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Entry
117737540 CDS
T09199
Symbol
ppargc1b
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-beta
KO
K17962
peroxisome proliferator-activated receptor gamma coactivator 1-beta
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
clum03029
]
117737540 (ppargc1b)
Mitochondrial biogenesis [BR:
clum03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
117737540 (ppargc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Autophagy_act_C
PBP1_TM
Cwf_Cwc_15
CDC45
Nop14
eIF-3c_N
Motif
Other DBs
NCBI-GeneID:
117737540
NCBI-ProteinID:
XP_034399470
Ensembl:
ENSCLMG00005003888
LinkDB
All DBs
Position
10:23000740..23075585
Genome browser
AA seq
919 aa
AA seq
DB search
MADCAPLLDEELSSFVFNYLTENSGSQYGEEEVCSDRLDTDFPDIDLSQLDTSDFDSVNC
LSELQWCNDQPSDASPASIHYSTADELFEIEEENAALLAALTDSLDGMVDAEVGGLSVFP
ALGEGPDREEDEEDDLPLGAEDFSQSMGAETDDPSLLKQLLLTPPNVPAAATTTAVAAAA
HKDRVHGHRYSNRSLQLRPTRPPVKSDLRQERKPRAVRPAGRLCTELHRHLTTARAPEDT
EEDEEEEEDDEDSESEEDDDDEEEEESSSSEVEGVAVASPAAVAAAPAEPAKPQFSSEKE
LRSVVELITYMHTYCLPVRKQQGWDRKDRDAPRPRARPEAPRPAAARVVLVAAPGGATGA
GGVPRRLPFARRREMKANSLLRELLQQSSSFDVSKPYRLHSPPYSHSHSPSRVPAPSGPA
RSATPKPEWRKDSSSPERRSRSYEALRSHEEAEAAAAAVEPEDGGSFSVRRSRRLASFPS
RFAKRLRPGRARDGERRDREEREVKLLPTQAGGRTTTTTATERLAAGDEQNEPCCHNEKR
ACLCLTLDPKSTGESQYSTKPFEQTLGVDLCGTAGLTPPTTPPHKPVEDELFKPAEGGKG
GEGGVGESVLADANAAAKGSSRLSRAHHQRKLPEQTELYAQLRRMGQAGDSGTHRAFGDH
DYCALSLGESRKRSAAMLGAILQAQGGGGGDGQTGEADDRVSGGNGRDGGERPVASGGGE
QLERQSAAAIAAAAAMASAPLTPASRCQAPAATPPVSEEEAERSSASRSPSPVLHLCPDS
PASKTDSSENSEICPDDKQRNKAKCDEDNCQVFYIHNLPTSVTQNMLRKRFQVFGKPEDC
KVIICNEERCGVIKIRQAGVQKHWRERETVFQNEPPGLRRLARKRYIDLDEAGPGPVKSK
YDALDFDTLLKEAQKSLHR
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggcggactgcgctccactattagatgaggaactctcgtcctttgtcttcaattacctg
acagaaaactccggcagccagtatggggaggaggaggtgtgttcggaccgcttggacact
gacttcccggacatcgacctctcccagctggacaccagcgacttcgacagcgtcaactgc
ctcagcgagcttcagtggtgcaacgatcagccgtcggacgcgtcgccggcctccatccac
tacagcacggcggatgagctctttgagatagaagaggagaacgcggcgctgctcgccgcg
ctgacggacagcttggacggcatggtggacgccgaggtgggcgggctctccgtcttcccc
gccctcggggaggggcccgaccgggaggaggacgaggaggacgacctgccgctcggcgcc
gaggacttcagccagtccatgggggcggagacggacgacccgtctctactgaagcagctc
ctgctgactcctcccaacgtgcccgccgccgccaccaccaccgccgtcgccgccgccgca
cacaaagacagagtccacggccatcgctatagcaacaggagcctgcagcttcggcccacg
aggcccccggtcaagagtgacctccgtcaggagcggaagccccgagcggtgcgtcccgcg
ggccgcctgtgcaccgagctccaccgccacctcaccactgctcgggcgcccgaggacacg
gaggaagacgaggaggaggaggaggacgacgaggacagcgagtcggaggaggacgacgac
gacgaagaggaagaggagtcttccagcagcgaggtggagggcgtggcggtggcgtccccc
gcggcggtggcggcggcccccgccgagccggcgaagcctcagttcagctcggagaaagag
ctgcgctcggtggtggagctcatcacgtacatgcacacctactgcctccccgtgcgcaag
cagcagggctgggaccgcaaggaccgtgacgcaccgcggccccgggccagacccgaggcg
ccgcgcccggccgccgccagagtcgtcctggtggccgctcccgggggcgcaaccggggcg
ggcggcgtccccaggaggctccccttcgcgaggaggagggagatgaaggccaactccctc
ctccgcgagctcctgcagcagagcagctctttcgacgtgagcaagccttacagactgcac
agccccccgtactcccactcgcacagccccagcagggtgcccgcgccctccggcccggcc
agatccgccaccccgaagccggagtggcgtaaagactcctcgtcccccgagaggagaagc
cgctcctacgaggctcttcggagccacgaggaggcggaggcggcggcggcggcggtggag
ccggaggacggcgggtccttctccgtgcgtcgctcgcgccgcctggcctccttccccagc
cgcttcgccaagaggctgcggcctggacgggccagggatggggagaggagggaccgggag
gagagggaggttaaactcctgccgacgcaagcgggaggcaggacgacgacgacgacggcg
acggagcggctggcggccggcgacgagcagaacgaaccctgctgccacaacgagaagcgg
gcctgcctctgtctgaccctcgaccccaagtccaccggagagtcccagtacagcaccaag
cctttcgagcagacgctcggcgtggatctgtgtggaacggcaggtctcacccctcccacc
accccgcctcacaaaccggtggaggatgagctcttcaaaccggcagagggaggaaaagga
ggcgaaggtggcgtcggcgagtcggtcctcgcggacgccaacgcagccgccaagggctcg
tcccggctgagccgcgcccaccaccagcggaagctcccggagcagacggagctgtacgcc
cagctgcggcgcatgggccaggccggcgacagcggcacccaccgggcgttcggcgaccac
gactactgcgcgctgagcctcggggagagccgcaagcgcagcgcggccatgctgggcgcc
atcttgcaggcgcaggggggcggcggcggagacggccaaaccggagaagccgacgatcgg
gtgtcgggcgggaacgggagggacggcggggaaaggccggtggcgtcgggaggcggcgaa
cagctcgagcggcagagcgcggcggcgatagcggcggcggcggcgatggcatcggcgccg
ttgacgccggcgtcgcgctgccaggcgcccgctgccacgccgccggtctcagaggaagag
gcggagcgctcgtccgcgtcccgctcgccctcgcccgtcctccacctgtgccccgactcc
cccgccagcaagacggactccagtgagaactctgagatctgccccgacgacaagcagagg
aacaaagccaagtgtgacgaggacaactgccaggtgttttacatccacaacctgccgacc
agcgtgacccagaacatgctgcggaaacgcttccaggtcttcggcaaacccgaggactgc
aaagtcatcatctgcaacgaggagcgctgcggggtgataaagatccgccaggcgggggtc
caaaagcactggagggagcgggagaccgttttccagaacgagcccccgggcctcaggagg
ctggcgaggaagcgctacatagacctcgacgaggcgggcccgggccccgtgaagagcaag
tacgacgcgctggacttcgacactctgctgaaggaggcccagaagtccctgcaccgctga
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