KEGG   Cyclopterus lumpus (lumpfish): 117737546
Entry
117737546         CDS       T09199                                 
Name
(RefSeq) signal recognition particle subunit SRP72-like
  KO
K03108  signal recognition particle subunit SRP72
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03060  Protein export
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    117737546
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:clum02044]
    117737546
Secretion system [BR:clum02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   117737546
SSDB
Motif
Pfam: TPR_19 TPR_14 SRP72 ANAPC3 TPR_2 SRP_TPR_like TPR_6 TPR_12 TPR_8 TPR_11 TPR_1 ARM_TT21 TPR_Slam BTAD SNAP TPR_MalT TPR_4 TPR_21 TPR_30 NatA_aux_su RNPP_C Coatomer_E ACT_6
Other DBs
NCBI-GeneID: 117737546
NCBI-ProteinID: XP_034399485
Ensembl: ENSCLMG00005012812
LinkDB
Position
10:22523444..22531662
AA seq 668 aa
MASGGVSVASLWTEVNRCGQNGDFTRALKAVTKILHENRDDVTALHCKTVCLVQTGSFKE
ALNVMNTHSKVLGSDVVFEKAYSEYRLNRVESALKTIEAAPEQTDKLKELYGQVLYRLER
YDDCKSVYTDLIRNSQDEYEEERKTNLAAVVASMSQWEEAPLEDLGLPESTYELCYNAAC
ALIGQGQLTESFNKLRQAEELCRVSLAEDSDVTEEDIESELAVIHSQMAYVMQLQGRTDE
ALQLYNQVIKLKPSDVGLLAVTANNIITINKDQNVFDSKKKVKLTNAEGVEYKLARKQLQ
AIDFNKALLAMYTNQADQCRKLASSLQSQNPGHPRPVLIQVAQLCREKQHSRAIELLQQF
SDQHPESASGIKLTMAQLYLIQGHVTKACDVLRSIEEFKHKSGMISALVTMYAHEEDIDS
AIEIFKQAIDHYQSEQPGSAAHLALVREAANFKLKYGRKKEAISDLEQLWKQNPKDIHTL
AQLISAYSLVDTDKAKSLSKHLPSADTMALNVDVDELENSIGATYVRKKAAKVTGENPPK
EQTQPGEIKKKKKKKKKGKRPKNCDLNATPDLERWLPMKERTYYRGKKKGKKKDQIGKGT
QGATAGGAAELDASKTASSPPTSPRPGSASGSSTAATAVPPRQQKPAASGATRKKVPQKK
KKGGKGGW
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggcgagcggaggggtctcggtggcttcgctgtggaccgaagtgaaccgttgcgggcag
aatggagactttacgagagccctgaaagctgtgactaaaatactccatgaaaacagggac
gatgtgacggctctccactgtaaaacagtctgcctcgttcagaccggcagcttcaaagag
gcgctgaacgtcatgaacacacactcaaaagtgctcggcagtgacgttgtgtttgagaag
gcgtacagcgagtaccggctgaacagagtggagagcgccctgaagaccatcgaggctgct
cccgagcaaacggacaagctgaaggagctctacggtcaagtgttgtacagactggagcgc
tacgacgactgcaagtccgtgtacacagacctgatcaggaactcccaggatgagtacgag
gaggagaggaagaccaacctcgctgctgtggtggcttctatgagtcagtgggaggaagct
ccattggaagatctaggtcttcccgagtccacgtacgagctgtgctacaatgctgcctgc
gctctgattggccagggacagctcacagagtccttcaataaactacggcaagcggaggag
ctttgcagagtctcattggcggaagattctgatgtgaccgaggaggacatcgagtcggag
ctcgccgtcattcattctcagatggcgtacgtcatgcagctacaaggtcggacggacgag
gctctgcagctctacaaccaggtcatcaagctcaagccgtcagatgtggggctgcttgct
gtgacggccaacaatatcatcacaataaataaggaccaaaacgtgtttgactccaagaag
aaggtgaaactgacgaacgccgaaggtgtcgagtacaagctggcgaggaagcagctgcag
gccatcgacttcaacaaagccctcctggccatgtacaccaaccaggcggaccagtgcagg
aaactggcgtccagtctccagtcccagaatccgggtcacccgcggccggtcctcatccag
gtggctcagctgtgcagggagaagcagcacagccgggccatcgagctgctccagcaattc
tcagaccaacatccagagagcgcatccggcatcaaactgacgatggctcagctctattta
atacaaggtcacgtaacaaaagcttgtgatgttctgaggtccatcgaagagttcaagcac
aaatcggggatgatttcagctctggtaacgatgtacgcccacgaagaagacatcgacagc
gccatcgagatcttcaaacaggctattgatcactaccagtccgaacagcccggatctgct
gcacacttggcgctcgtacgagaagctgccaatttcaaactgaagtacggacggaaaaaa
gaagccattagtgatctggagcagctgtggaagcaaaaccccaaagacatccacacgctg
gcacaactcatctctgcgtattctctggtggacacggacaaagccaaatccctcagcaag
cacctcccgtccgcggacacgatggccttaaacgtggacgtggacgagctggagaactcc
atcggcgccacctacgtcaggaaaaaggccgccaaggtcaccggagaaaaccctcccaaa
gaacaaacccagccgggcgagatcaagaagaagaagaagaagaagaagaaaggcaagcgg
cccaagaactgcgacctcaacgcgacccctgacctggagaggtggctgcccatgaaggag
cgcacctactacaggggcaagaagaaggggaagaagaaggaccagataggaaaaggcacg
cagggggcgacggcggggggggcggcggagctggatgccagtaagaccgccagtagcccc
cctacctcccctagaccagggtccgcgtccgggtcctctacggccgccaccgcggtccct
ccgcgacagcagaaacccgcggcctcgggagccacgcgcaagaaggtaccgcagaagaag
aagaagggaggcaaaggaggctggtag

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