Cyclopterus lumpus (lumpfish): 117737595
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Entry
117737595 CDS
T09199
Name
(RefSeq) TBC1 domain family member 9B
KO
K19951
TBC1 domain family member 8/9
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117737595
Membrane trafficking [BR:
clum04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117737595
Endosome - Golgi transport
Rab GTPases and associated proteins
117737595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
117737595
NCBI-ProteinID:
XP_034399541
Ensembl:
ENSCLMG00005004189
LinkDB
All DBs
Position
10:complement(23853942..23870625)
Genome browser
AA seq
1196 aa
AA seq
DB search
MWIQPEEVLMAGALWVSERANPFFILQRRKGHGRGGGLSGLLVGTLDVVLDSSARVAPYR
ILLQTADSQIYWNVACGSSRKEITEHWDWLEANLLQTISIFDNDEDVITFVKGKISGIIA
EENRLKQGEEQEEDCGKFREAELKMRRLFGMPEEEKLVNYYSCSYWKGRVPRQGWLYLSV
NHLCFYSFLLGKEVTLVVQWTEVTQLEKNATLVFPESVRVSTRHTEHFFSMFLNINDTFK
LMEQLATIAMRQLLDNEAFAADRSLPKPCKTLRNVSALKRDLDARAKNERYRMAFRLTQD
ERLDGHTDCTLWTPFAKMHVVGQLFISNNYICFNSREEDLCQLIIPLREVSIVEKADSSS
VLPCPVSISTKNKMNFLFANLKDRDFLVQRISDFLQRTPDSSWGDTSPLSLIGHSASSSA
PLSSGSESVHRGRHYHPGLPTASHGLLQLYHQDAPEDLGPKAMKEKMKEEAWNIHFSEFG
RGVCMYRTSRTRDLVLNGIPERLRGELWLLFSGAQNEMATHPGYYGDLVEQAMGLCSLAT
EEIERDLHRSMPEHRAFQNETGIAALRRVLTAYAHRNPGIGYCQAMNIVTSVLLLYCPEE
EAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELTRAFLPLLYEHMQELGVISTISLSW
FLTLFLSVMPFDSAVLLVDCFFYEGIKVTFQVALAVLHDNMDALLSCSDEGEAMTILGRY
LDNVVNKQTVAPPIPHLHALLTSGDDPPPEIDIFELIKSSYEKFGSLRSDVIEQMRFKQR
LKVIQSLEDTAKRSVVRAMMTESAFSIEELEELYCLFKSKHMTSCYWGSSSSAAERHDPS
LPYLEQYRIDPAQFAQLFASLAPWVCGGHTSTLSARLFRLLDQNKDGLVNFKEFVTGLSG
MYHGDMTEKLKLLYKLHLPPAVCPEEAESALEATHFFTEEEPQGEKGKDGGADSEEKKEE
KVKDYRYYLRMWAKEKEPKTETIKDLPRMNQEQFIDLCKTLYNMFSEEPLEQQLYHSIAT
VASLLLRIGEVGKKFNNNNGGRKADDAPAAAAQAPPLQPQREEGPGEGGSGETQVCRALA
DAQLEPAAPDEETKDDDASLSSYSVVSSGSLQSEDIGDDAVLIGGGGGQRRGSVLDVDWS
ITFEQVLASLLTEPPLVDYFEKKRDFQNKMAASKAQRAVERQTSSASDHELAQHST
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtggatccagccggaggaggtgctgatggccggagcgctctgggtctctgagcgggcg
aacccgttcttcatcctgcagaggaggaagggacacggccgggggggggggctctctggt
ctcctggttgggactctggatgtggttctggactccagtgccagagtggctccttacagg
atcctgctgcagactgcggactctcagatctactggaacgtagcctgtggctcatccagg
aaggagatcacggagcattgggattggctggaggccaacctgctccagaccatctccatc
ttcgacaacgatgaagacgtcatcaccttcgtcaaagggaagatctcgggcatcattgcc
gaggagaaccggctgaagcagggggaggagcaagaggaggattgtgggaagtttcgagag
gcggagctaaagatgaggaggctgttcgggatgcccgaggaggagaagctggtgaactat
tactcctgcagctactggaagggccgagtgccgcggcagggctggctctacctgtccgtc
aaccacctgtgcttctactccttcctattgggcaaagaggtgaccctggtggtgcagtgg
acggaggtgacccagctggagaagaacgccactctggtgttcccggagagcgtccgcgtc
agcacgcgtcacaccgaacatttcttctccatgttcctgaacatcaacgacaccttcaag
ctcatggagcagctcgccaccatcgccatgcgccagctgctcgacaacgaggccttcgcc
gccgaccgctcgctgcctaaaccctgcaagacgctcaggaatgtctctgcgctcaagagg
gatttggacgcgcgggcgaagaacgagcgctaccggatggcgttccggctgacgcaggac
gagcgtctggacggacacacggattgcacgctgtggacgccgttcgccaagatgcacgtg
gtcggacagctgttcatctccaacaactacatctgtttcaacagcagagaagaagacttg
tgtcaactcatcatccctctcagagaggtgtccattgtggagaaggcagacagcagcagt
gtcctgccttgtcccgtctccatcagcaccaagaacaagatgaacttcctgttcgccaac
ctcaaagacagagacttcctggtccagcgcatctccgacttcctgcagcggacacccgac
agctcgtggggcgacaccagcccgctgtctctgattggtcactcggcgtcctccagtgcc
cccttgtcctcggggtctgagtccgtccacagggggcgccattaccaccctggtctgccc
acggccagccacggtttgctgcagctctaccaccaagatgctccggaggacctgggaccc
aaagccatgaaggagaagatgaaggaagaggcgtggaatatccatttctcagagttcggt
cgaggtgtctgcatgtaccgaacctcaagaaccagagacctcgtcctcaacgggatcccc
gagcgcctgagaggggagctgtggctgctgttttctggagcacagaacgagatggcgacc
caccctggttactacggcgacctggtggagcaggccatggggctgtgttcgctggccacc
gaggagatcgagcgcgacctccaccgctcgatgcccgagcaccgggccttccagaacgag
acgggcatcgcagcgctgcgccgcgtcctcacggcctacgctcaccgcaacccggggatc
ggatactgtcaggccatgaacatcgtcacctctgtcttgttgctctactgcccggaggag
gaagccttctggctgttggtggcgctgtgtgagcggatgctgcccgactactacaacacc
agggtcgtaggtgctctggtggatcagggcgtgtttgaggagctgactcgagccttcctc
cctctcctgtacgaacacatgcaggagctgggtgtgatctccaccatcagcctgtcctgg
ttcctcacgctcttcctgtccgtgatgcctttcgatagcgccgtcctattggtcgactgc
ttcttctacgaaggaatcaaggtcacctttcaggtggcgctggcggtgcttcacgacaac
atggatgccctgctgtcctgcagcgacgagggagaagccatgaccatcctgggcagatac
ctggataatgttgtaaacaaacagactgtggctcctcccatccctcacctgcacgccctg
ttgacgagcggagacgatcctccacctgagattgacatcttcgaactcatcaagtcatcg
tatgagaagttcggcagcttgcgctccgacgtcatcgagcagatgaggttcaagcagagg
ttaaaggtcatccagtcgctggaggacacggccaagaggagcgtggtgcgagcgatgatg
acggagtcggccttcagcatcgaggagctggaggagctgtactgtctctttaagtccaaa
cacatgaccagctgttattggggctccagtagctcggcggccgagcgccacgaccccagc
ctgccctacctggagcagtaccgcatcgacccggcccagttcgcccagctgttcgcctcg
ctggcgccctgggtctgcggaggccacacctccacgctgtcggcccgcctcttcaggctc
ctggaccagaacaaggacgggctggtcaacttcaaagagttcgtcaccggactcagtggg
atgtaccacggagacatgacggagaagctcaagctgctgtacaagctccacctcccacca
gctgtttgtcccgaggaggcggagtctgccctggaggctacacacttcttcacggaggag
gagccacaaggtgagaaggggaaggatggaggcgcagacagcgaggagaagaaagaggag
aaggtgaaggactaccggtactacctgagaatgtgggccaaagagaaggaacccaagacg
gagaccatcaaagacctgcccaggatgaaccaggagcagttcatcgacctgtgtaaaacc
ctgtacaacatgttcagcgaggagcctctggagcagcagctgtaccactccatcgccacc
gtggccagcctgctgctgcgcatcggagaggtcggcaagaagttcaacaacaacaacggc
ggcaggaaggccgacgacgcccccgccgccgccgctcaggctccgcccctccaacctcag
agggaggagggccccggcgaggggggttcgggcgagacccaggtgtgccgggctctggcc
gacgctcagttggagccggcggccccggacgaggaaaccaaagacgacgacgcgtcgctg
tcgtcgtattcggtggtgagctccggctcgctgcagagcgaggacatcggcgatgacgcc
gtgctgatcggcggcggcggcggtcagaggcggggcagcgtgctggatgtcgattggtcg
atcaccttcgagcaggtgctggcgtcgctgctgacggagccgccgctcgtggactacttc
gaaaagaagagggacttccagaacaagatggccgccagcaaggcgcagagggcggtggag
cgtcagacgagctccgcctccgaccacgaactcgctcagcattccacctga
DBGET
integrated database retrieval system