Cyclopterus lumpus (lumpfish): 117737597
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Entry
117737597 CDS
T09199
Symbol
matr3l1.2
Name
(RefSeq) matrin 3-like 1.2 isoform X1
KO
K13213
matrin 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117737597 (matr3l1.2)
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117737597 (matr3l1.2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117737597
NCBI-ProteinID:
XP_034399543
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Position
10:complement(24085636..24102861)
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AA seq
1104 aa
AA seq
DB search
MSQKSQSDGGQKHFAVGRGLLAAAETLNFSMNEQRSGRQMGGAASGVGVGGGGGGSGMDN
QDGGSQMSRRGGGGHIGNTMKLFASLGLSPSDLDALAEIPEEDISVETLPRILMQLKSRK
GDAGERRGASSVSSDAGYRGGRDSWDNAHMGRMGGPSLGTGSARGQTSADFGYSSLQDGA
PSQGYGLNYGGGGGGSSRERPYSELSHHDSYGGGLSIGPPASDPGFRQRRIGSPSNGKVQ
DFLGVTPPMFPHVCSLCDFDVHSTMEWNQHTNGVRHDANRRLLLNMYQDWEPGMSSGRSG
SLLDTPNMSAGLLGPAPMSSSHTGGGTSSSWGGGGGGPGLSGKNQSGQNKLRSRVVVVKY
DRKPLSNKTLFSFTEPFGRLTEHLVLKNKAFLEMSSHEEAVDMVNYYEQQQASLYGKPLS
FYLSRRLMVIEKDERATERHVDRPAREVKGQGSQVVFFSNLPREEERKKELLTIAGRFGI
VEKHLFLTDQAFVQLGTPEDAEMLVKYYSVNSLTIKGRPIRLNICTKYKTLTVNRRQGGD
GRSQKSSGANASSGFGTRTSFNPARTSSSKSSSRTREEQEKEEELKPEEQPPAEEEEEEV
SGVMEGEEVEEQVTDGDAEGEEPEGAAEEPEEVKQEEVSVDVTEDAPGDVGVAEGEVQQE
AESEGQTEQAEADVTAEEHENKEEPAAEPGEPSETVEGDPPADVFDGDFLENMEDFVTLD
ELEEDEDEADGESDSTDSTRRGGMRVVNIVGFRRGYNFINELQGLAKPFGKVVKHLVLDL
RPEAYLQFATEEEAKAMASFYNSNITASVCGRPVRVSHSISYPTIQCGSSKVVYVGQIPN
TKYSDDAVLKLAEPFGRVKKYFLNRLKRECFIEMERAEEAEKMAEGYKADPPRFSGKRLT
VYVSRKYRQLKHGHRCPDRPKRENSSMSPSSSQQPEEPPAKKCKEEEKEPEEEEQVEVEV
EVTGEAEEVQSCDDEKKEEKSSEDIPEVSDRNQTSSQELQEAEQAEAEMDTSANQNGRTE
APPPAENKPSVASLPLPPHDPDTPIGVEHVKMGFYCRVCFLFYSNEETAKKTHCSSQTHH
DKLQKHLEKEQTKAEKKKGKKTSS
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaagtcgcagtctgatgggggtcagaaacacttcgccgtgggccgcgggctc
ctggccgccgccgagaccttgaacttcagcatgaacgaacagcgatccggccggcagatg
gggggtgcggcctctggcgtgggggtgggcggcggcggcggcggcagcgggatggataac
caggacggcggctcccagatgtcccggcgtggcggcggcggccacattggcaacactatg
aagctgttcgccagtttggggctgtcgccctccgacctggacgctctggccgagatcccg
gaagaggacatcagcgtggagacgctgccgcgcatcctcatgcagctcaagagccgcaag
ggggacgcgggagagcggcggggggcgtcctccgtgtcctccgacgccgggtatcgagga
ggacgggacagctgggacaacgcgcacatggggaggatgggcggtccttctctgggtacc
ggttcagcccggggtcagacctccgcagactttgggtacagctcgctgcaggacggcgct
cccagccagggctacggcttaaattacggcggcggcgggggggggagcagcagagagagg
ccgtactcggagctttcccaccatgactcctacggtggtggcctcagcatagggccgccg
gcatccgaccccggctttaggcagaggaggattggctccccgtccaacggaaaggtccaa
gacttcttgggggtcacgccccccatgttcccccacgtgtgctctctttgtgactttgac
gttcactccaccatggagtggaaccagcacactaacggagtccggcacgatgcaaaccga
cggctgctgctcaacatgtatcaagactgggagcctggaatgtcctcgggcagaagtggg
agtctgctcgacacccccaacatgtctgcagggctgcttggacctgcccccatgtcttca
tctcacacaggaggagggacgtcctccagctggggaggagggggaggaggtcctggtctg
tcgggaaagaaccagtcgggacaaaataagctgaggagccgggtggtggtggtgaagtac
gaccggaagccgctgagcaacaaaaccctgttctccttcacggagccgttcggccgcctg
acggagcacctggtcctcaagaacaaggccttcctggagatgagcagccacgaggaggcc
gtggacatggtcaactactacgagcagcagcaggcgtctctgtacggcaagccgctcagc
ttctacctgtccaggaggctgatggtgatcgagaaagacgaacgggcgaccgagaggcac
gtggaccgacccgcccgggaggtcaaaggtcaaggcagccaggtggtgttcttctccaac
ctgcccagagaggaggagaggaagaaggagctgctgaccatcgccggacgattcggcatc
gtggagaaacacctgttcttaaccgaccaggcgtttgtccagctggggactccggaggat
gctgagatgctggtgaaatattacagcgtgaactctctgaccatcaaagggaggccgatc
cgcctcaacatctgcaccaagtacaagaccctgactgtgaaccggagacaaggaggagac
ggccggagccagaagagcagcggagctaacgcctcctccggctttggaaccaggacctcc
ttcaaccccgccaggacctcctcgtccaaatcctcatccaggaccagagaggagcaagag
aaggaggaggagctgaagcccgaggagcaacctcctgcagaggaggaggaggaggaggtg
tcaggggtgatggagggggaggaggtggaggagcaggtaacggatggagatgcagagggg
gaggagccagagggagcagcagaggagccagaggaggtcaaacaggaggaggtttctgtt
gacgtcactgaagacgcacctggagatgtgggcgtggctgaaggtgaagtccaacaggag
gcggagtcagagggacaaacggaacaggcggaagccgacgtcactgctgaagaacatgag
aacaaagaagaaccggccgcagaaccaggggaaccttcagagacggtggagggagatccg
cctgctgacgtgtttgatggagacttcctggagaacatggaggactttgtgacgctggac
gaactggaggaagacgaggacgaagcagacggagagtccgactccaccgacagcaccaga
agaggaggcatgagggtggtcaacatcgtgggcttcagacgaggttacaacttcataaat
gagctgcagggactcgccaaaccttttgggaaggtggtgaaacatctggttctggacctg
agaccagaggcgtaccttcagttcgccacagaagaagaagctaaagcgatggcgagcttc
tacaacagcaacatcacggcgtcggtgtgcggccggccggtgagggtcagtcactccatc
agctacccgaccatccagtgcggctccagtaaggtggtctacgtgggtcagatccccaac
actaaatactccgacgacgccgtcttaaaactggccgagccgtttgggagagtcaagaag
tatttcctcaacaggctgaagagagagtgtttcatagagatggagagagcggaggaagca
gagaaaatggcggagggttacaaggcggatcccccgaggttcagcggtaaacgtctcacg
gtctacgtcagcaggaagtacagacagctcaaacatggacatcgatgtcctgaccgaccc
aagagggagaacagcagcatgtctccctcgtcctcccaacagcctgaagaacctcctgcc
aagaaatgtaaggaggaggagaaggaaccagaggaggaggagcaggtggaggtggaggtg
gaggtgacgggagaggcagaggaggtgcagagttgtgatgacgagaaaaaagaagaaaag
tcatcggaggacattcctgaagtctctgatcggaaccagacgagcagccaggaactgcag
gaggcggagcaggcggaggcggagatggacacatcggccaatcagaacggacgtaccgag
gcccccccgccggctgaaaacaaacccagcgtagcgtctctgccgctgcccccccacgac
cccgacacccccatcggtgtggaacatgtgaagatgggcttttactgccgcgtctgcttc
ctgttttactccaacgaagagacggccaagaagacgcactgcagcagccaaacgcaccac
gacaagctgcagaaacatctggagaaggaacagaccaaagcggagaagaagaaagggaag
aagacgagctcctag
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