KEGG   Cyclopterus lumpus (lumpfish): 117737614
Entry
117737614         CDS       T09199                                 
Symbol
rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X1
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:clum04121]
    117737614 (rnf4)
Enzymes [BR:clum01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117737614 (rnf4)
Ubiquitin system [BR:clum04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117737614 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf_RING_Vps8 zf-RING_4 zf-rbx1 Prok-RING_4 Rtf2 RING_XB3-XBAT31 zf-C3HC4_4 zf-UDP TRAF3_RING zf-RING_11 IBR_1 zf-RING_16 zf-Nse zf-RING_6 zf-ANAPC11 zf-RING_10 zf-C3HC4_5
Other DBs
NCBI-GeneID: 117737614
NCBI-ProteinID: XP_034399573
Ensembl: ENSCLMG00005004166
LinkDB
Position
10:complement(23793775..23798638)
AA seq 237 aa
MHQNQTNSGSCGQNQDTDDCLGESVFRISDMSSSAQRKRRTTGSPLVSRLRTKTSRGANA
RRPANANRAAIRTANVSRPSDGDPAAPTETIAGMNNTEDSVEEVVDLTCEGSEAVVDLTN
NDSVLLVDEGPQNRRVPTSESYVVSSDEEDDAPPVLNTAIVSYVQTNSSSRSTPGTISCP
VCLDSYSEIVDSGRLVVSTKCGHVFCSQCLRDALTSSHTCPTCRKRLTHRQYHPLYI
NT seq 714 nt   +upstreamnt  +downstreamnt
atgcatcagaaccagaccaatagcggctcgtgcggtcagaaccaggacacagatgattgt
cttggtgagagcgtcttcaggatctctgacatgagcagctctgctcagaggaagaggagg
accacaggtagtcctctggtttccaggctcagaaccaagaccagcagaggggctaacgct
aggaggccggctaacgctaacagagcagcaatcaggacggctaacgttagcaggccttct
gatggtgatcctgccgcccccacagagaccatcgctgggatgaacaacactgaggatagt
gtagaggaggtggtggatctgacctgtgagggatcagaagctgtggtcgatctgacgaac
aacgactctgttctgctggtggacgaaggtccacagaacaggagagtccccacgagtgag
agctacgtcgtcagcagtgatgaagaggacgacgcgccgcctgtcctcaacactgccatt
gtgtcctacgtgcagaccaacagctcctccaggtcgactccggggacgattagctgtccc
gtctgtctggactcctactctgagattgtggacagcggccgattggttgtttccactaaa
tgtggtcacgtgttctgcagtcagtgtctgagagacgctctgacgtcatcacacacctgt
cccacctgcaggaagagactgacccaccgccagtaccaccccctatacatctga

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