Cyclopterus lumpus (lumpfish): 117737640
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Entry
117737640 CDS
T09199
Symbol
stx5a
Name
(RefSeq) syntaxin-5a isoform X1
KO
K08490
syntaxin 5
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117737640 (stx5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117737640 (stx5a)
Membrane trafficking [BR:
clum04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
117737640 (stx5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Apolipoprotein
SEO_N
DUF16
HrpB7
Syntaxin
Vac_Fusion
DUF6746
DUF2207_C
Use1
DUF5063
MCPsignal
YwqH-like
AI-2E_transport
Motif
Other DBs
NCBI-GeneID:
117737640
NCBI-ProteinID:
XP_034399617
Ensembl:
ENSCLMG00005009712
UniProt:
A0A8C2Z4T1
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All DBs
Position
10:complement(15406691..15414461)
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AA seq
329 aa
AA seq
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MTCRDRTLEFQSACKSLQGRPNGVPLNKPTLSALRQRSDFTVMAKRIGKDLSNTFAKLEK
LTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDLVRSRGAPGGRHIQTHSNT
IVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSQPPVSSSPLMANNFRSRKKGAQ
EPHAAREPRNGYQVNTTSNLKESSVLMQDESRSMGDVAINMDSQTNPMQLQLIDEQDSYI
QSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDANVEDTQLNVESAHTEILKYF
QSVSSNRWLMIKIFLVLVVFFIIFVVFFA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgccgtgaccgtaccctcgagttccagtccgcctgtaaatctctccagggcaga
ccgaatggagtcccgctcaataaaccaactctcagcgctctcaggcagcgcagcgacttc
acagttatggccaagagaattggaaaagacttgagcaatacatttgccaaactggaaaag
ctcactattttggcaaaaagaaaatctctatttgatgacaaggcagtggagattgaggag
ctaacatacatcattaaacaagacatcaacagtctaaacaaacagattgcgcagctgcag
gacttggtgaggtcccgcggagctccaggtggccgacacatccaaacccactctaacact
atagtggtgtcattacagtccaaactggcttcaatgtccaatgactttaagtcagtccta
gaagtcagaacggagaacctgaagcagcaacgcagcaggagagagcagttctcccagccc
ccagtctcgtcttctcctctgatggccaacaacttcaggagccgcaaaaaaggggcccag
gagccgcatgcagctcgtgagccacgcaatggttaccaggtcaatacaacctcaaattta
aaagagagctcggtcctgatgcaggatgagtccaggagtatgggcgatgttgccatcaat
atggactctcagaccaatcccatgcagctccagcttattgatgagcaggactcgtacatc
cagagccgtgcagacaccatgcagaacattgagagcaccattgtggagctgggctctata
ttccagcagctggcacacatggtcaaggagcaagaggagaccattcagaggatcgacgct
aacgtggaggacacacagcttaatgtggaatccgcccacacagagatcctcaaatacttc
cagtcagtctcctccaaccgctggctgatgatcaagatctttctcgtcctcgtcgtcttc
ttcatcatctttgttgtcttctttgcttga
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integrated database retrieval system