KEGG   Cyclopterus lumpus (lumpfish): 117737640
Entry
117737640         CDS       T09199                                 
Symbol
stx5a
Name
(RefSeq) syntaxin-5a isoform X1
  KO
K08490  syntaxin 5
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    117737640 (stx5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117737640 (stx5a)
Membrane trafficking [BR:clum04131]
 SNARE
  Syntaxin (Qa)
   Stx-cisGolgi
    117737640 (stx5a)
SSDB
Motif
Pfam: SNARE Syntaxin-5_N Apolipoprotein SEO_N DUF16 HrpB7 Syntaxin Vac_Fusion DUF6746 DUF2207_C Use1 DUF5063 MCPsignal YwqH-like AI-2E_transport
Other DBs
NCBI-GeneID: 117737640
NCBI-ProteinID: XP_034399617
Ensembl: ENSCLMG00005009712
UniProt: A0A8C2Z4T1
LinkDB
Position
10:complement(15406691..15414461)
AA seq 329 aa
MTCRDRTLEFQSACKSLQGRPNGVPLNKPTLSALRQRSDFTVMAKRIGKDLSNTFAKLEK
LTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDLVRSRGAPGGRHIQTHSNT
IVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSQPPVSSSPLMANNFRSRKKGAQ
EPHAAREPRNGYQVNTTSNLKESSVLMQDESRSMGDVAINMDSQTNPMQLQLIDEQDSYI
QSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDANVEDTQLNVESAHTEILKYF
QSVSSNRWLMIKIFLVLVVFFIIFVVFFA
NT seq 990 nt   +upstreamnt  +downstreamnt
atgacgtgccgtgaccgtaccctcgagttccagtccgcctgtaaatctctccagggcaga
ccgaatggagtcccgctcaataaaccaactctcagcgctctcaggcagcgcagcgacttc
acagttatggccaagagaattggaaaagacttgagcaatacatttgccaaactggaaaag
ctcactattttggcaaaaagaaaatctctatttgatgacaaggcagtggagattgaggag
ctaacatacatcattaaacaagacatcaacagtctaaacaaacagattgcgcagctgcag
gacttggtgaggtcccgcggagctccaggtggccgacacatccaaacccactctaacact
atagtggtgtcattacagtccaaactggcttcaatgtccaatgactttaagtcagtccta
gaagtcagaacggagaacctgaagcagcaacgcagcaggagagagcagttctcccagccc
ccagtctcgtcttctcctctgatggccaacaacttcaggagccgcaaaaaaggggcccag
gagccgcatgcagctcgtgagccacgcaatggttaccaggtcaatacaacctcaaattta
aaagagagctcggtcctgatgcaggatgagtccaggagtatgggcgatgttgccatcaat
atggactctcagaccaatcccatgcagctccagcttattgatgagcaggactcgtacatc
cagagccgtgcagacaccatgcagaacattgagagcaccattgtggagctgggctctata
ttccagcagctggcacacatggtcaaggagcaagaggagaccattcagaggatcgacgct
aacgtggaggacacacagcttaatgtggaatccgcccacacagagatcctcaaatacttc
cagtcagtctcctccaaccgctggctgatgatcaagatctttctcgtcctcgtcgtcttc
ttcatcatctttgttgtcttctttgcttga

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