Cyclopterus lumpus (lumpfish): 117737663
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Entry
117737663 CDS
T09199
Symbol
gpc3
Name
(RefSeq) LOW QUALITY PROTEIN: glypican-3
KO
K08109
glypican 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
clum00535
]
117737663 (gpc3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
117737663 (gpc3)
Proteoglycans [BR:
clum00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
117737663 (gpc3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
Others
117737663 (gpc3)
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Gene cluster
GFIT
Motif
Pfam:
Glypican
Motif
Other DBs
NCBI-GeneID:
117737663
NCBI-ProteinID:
XP_034399642
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Position
10:complement(6538792..6616804)
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AA seq
644 aa
AA seq
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MLGSSVRGALFLCACLQLFSLPAGQVPTCQEVRTVFQSLHPGSKWVPETPVSGADLQVCQ
TKGPTCCSKKMEERYQVAARSNMESGLQVVSAQLKRLIIQNAAIFQEAFDLVLRHGRNFT
LAMLKSEFPGLGGGAQSTVGQLFLDLSLYILGSDSTVDHMVAVLYGRLFPLAYRHLLGGS
TSSVSEECVRGAWKDSGAFGPYPKLMMTRLSRSLLATRVFLQALNLGIEVVNTTDHLRPS
RDCGRSLLRLWYCPHCQGLLGPPACRGFCQAVMHGCLGGAAEVQPHWRSYVDGLGKLAGA
MRGEQDMEAVVLRLPSMIKLALKHAVNARTRLTALVSGMCGNAPQRAARSVGSPPAAPPP
PPPPAASAARNAQPLPPDSDETLVGLRREFISNLKGFSSFYSGLGEALCSREPAPANHSL
CWNGQEMTDRFPGPGLKRLHPGSESRSNKPPEPIISQIIDKLKHINQLLRLVTVSDKRWR
ARSRGADTWSDDGEDGFESGDCDDEDECTGVSGLGPPPRRKRLRIFAGQTQNGLSTGNFA
WLQMREVVYMTTVHVDTTVTLCSRRRETSSGSRLAPTSRPPLLPRRSLGHVRLSLRKPNK
EQVKLQTVGRKETKQREREKTAGTRGLRYXRHKAGAAEQTRRRE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgctcggctcatcggtccgcggcgcgctcttcctgtgcgcctgcctccagctcttctcg
ctgcccgcaggacaggtgccgacctgccaggaggtgcgcacggtgttccagtctctgcat
ccgggctccaagtgggtccccgaaaccccggtgtcaggtgcggatctgcaggtgtgccaa
accaaaggcccgacctgctgttccaagaaaatggaggagcggtatcaggtagcagcacgg
agcaacatggagtctggtctgcaggttgtcagtgctcaactcaaacgtctcatcatccag
aacgccgccatattccaagaggccttcgacctggtactgcgtcacggccgaaacttcacg
ctggccatgctgaagtcggagttcccaggtctcgggggcggagcccagagcacagtgggg
cagctcttcctggacctgtcgctctacatcctgggctcggactccacagttgaccacatg
gtggcggtgctctacggtcgcctcttccctctggcctaccgccacctgctgggcggcagc
acgtcctccgtttctgaggaatgtgtaagaggagcctggaaggactccggagcatttggc
ccgtaccccaaactgatgatgacccgtctgtcccgctccctgctggccacgcgggtcttt
ctgcaggcactgaacctgggcatcgaggtggtcaacaccaccgaccacctgcggcccagc
cgggactgtggccggtccctgttgaggctgtggtactgcccgcactgccagggcctgctg
gggccaccggcctgcaggggcttctgccaggccgtgatgcacggctgcctggggggagcg
gccgaggtgcagccgcactggaggagctacgtagacggactggggaagctggccggagcc
atgaggggggagcaggacatggaggccgttgttcttcggttgccttcgatgatcaaactg
gccctcaagcacgctgtgaacgcccgcacccgcctcactgccctggtgagcggcatgtgc
ggaaacgctcctcagcgcgccgcgcgctcggtgggctccccccctgctgctcctcctccg
ccgccgcctcccgctgcctccgcggcccgcaacgcgcagcccttacccccggactccgat
gagactctggttggcctccgcagggagttcatatccaacttgaagggcttcagctccttc
tacagtggtctcggggaggcgctgtgcagccgcgagcccgctccggcaaaccactccctc
tgctggaatgggcaggagatgacagacaggtttcctgggccgggcctgaagagattgcac
cccggctccgagtcccgaagcaacaagccccctgagccgatcatcagccagatcatagac
aaactcaaacacatcaaccagttgctgcggctggtgaccgtgtccgacaaacgctggaga
gcccggtcgcgtggagcggacacgtggagcgatgacggcgaggacggattcgagagcggc
gactgcgacgacgaagacgagtgcaccggagtgtcgggcctggggccgccgccgagacgc
aagcggctacgcatcttcgcaggtcagactcaaaacggactctcaaccggcaacttcgcg
tggttacaaatgagagaggtcgtttacatgactactgtacatgttgacaccaccgtgaca
ctatgcagcaggagacgtgagacttcctcaggtagccgcctcgccccgacctctcgacct
cccctcctcccccgccgatccctcggacacgtcagactctctctccgaaagccaaacaaa
gaacaagtgaagctacaaaccgttgggagaaaagaaaccaaacagagagagagggagaaa
acagcgggaacgaggggtctccgatacnatcggcacaaagccggcgcagctgagcaaaca
cgccgaagggagtag
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