KEGG   Cyclopterus lumpus (lumpfish): 117737729
Entry
117737729         CDS       T09199                                 
Name
(RefSeq) protocadherin beta-16-like
  KO
K16494  protocadherin beta
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:clum04515]
    117737729
Cell adhesion molecules [BR:clum04515]
 Cadherins
  Protocadherins
   117737729
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th Bact_surface_Ig-like 7TM_GPCR_Sri Peptidase_S55 GPR180-TMEM145_TM
Other DBs
NCBI-GeneID: 117737729
NCBI-ProteinID: XP_034399769
LinkDB
Position
10:12957502..12960290
AA seq 826 aa
MMARLWITDIRGRGQALFVILCLFTRSSVTGQARYSVAEEQGEGSFVGNIARDLGLDVVR
LVSGKARIITKGSRQYVDLNRDKGTLVIKERIDREELCGKTTPCSFSFEVILENPIQLYR
VTVEVIDINDNSPSFPKDEITLNIAESVASTTRFSLESAYDPDVGINDIQKYILKPVDHF
KLEVQSQSDGGKFIEMVLQNPLDREKEETHTLVLIASDGGEPHRSGTVRIHITVLDANDN
APVCSQPVYKAEVKENSPEGTVVTTVSSNDADKGVNGDVTFSIAHVTREAKQLFEVNVKT
GEIKVSGKLDFEKSKTYQLNVKASDHGGYSDTCKVIIQIIDENDNVPTIQMMSFSYSISE
DSPPGTTIAVINVDDEDSDGNGIVKCSINADMPFKIESSLTGYYTIVTDNFLDRETIPEY
NITITVSDQGSPPLTSRKHINVKVSDVNDNLPTFYQSEYIKTVPENNSPGFSVFTLSASD
ADWGQNARFSYFLEEKMINGAAVSSLVSVNSESGVIHAVRSFDYEQLKWFEFNVTARDAG
SPPLSSVAIVRIVVQDQNDNPPQVLYPVQTGGSLVAEMVPRSVDVGYLVTKVVAVDVDSG
QNAWLSYKLQKATDRALFEVGLQNGEIRTIRQVTDKDAVKQRLTVIVEDNGQPSRSATVI
VNVAVADSFPEVLSEFIDFTQDKEYNDNLTFYLVLALAVVSFLFITSLVVIISVKIYRWR
QSRVMYHSNLPVIPYYPPRYSDTLGTGTLQHVYNYEVCRTTDSRRSDCKFNGAGSQNVLI
MDPSSTGTMQRIQSEKSILDEPDSPQEVRKNTQHVYSLRYFFSEFD
NT seq 2481 nt   +upstreamnt  +downstreamnt
atgatggctcgtttgtggataaccgatataagaggccgaggacaagcactgtttgtcatt
ctttgtctttttacgcggagctcagtgactggacaggctcgctattccgtagcggaggag
cagggagaggggtcttttgttggaaacatcgccagagatttaggtttggatgtggtgagg
ctcgtttcaggtaaagctcgtatcattacaaaaggaagccgacagtacgttgatttaaac
cgagacaaaggcacccttgtgattaaagagcgaatcgaccgagaagagctctgtggaaag
acgacgccctgtagcttcagtttcgaggtaattttagaaaatccaatccagctttatcgg
gtaaccgtggaggttatagacataaacgataacagcccgtccttcccaaaggatgaaatc
actttaaatatagcggaaagtgttgcatcaactactcgcttctcactagagagtgcatac
gaccccgatgttggaattaacgacattcaaaaatacatactcaaacccgtagatcatttc
aaattggaagtacagagccagtctgatggagggaaattcattgaaatggttttacaaaac
ccattagaccgagagaaagaggagactcacacgctggtgctgattgcttcagatggaggg
gaaccacacagatcagggacagtacgtattcatattactgtgctagatgccaacgataat
gctccagtgtgtagtcagcctgtttataaagcagaagtcaaggaaaactctccagaagga
actgtcgtcaccactgtgagctcaaatgacgcagataaaggagtcaatggtgatgtaaca
ttttccatagcacatgtcaccagagaagcgaagcagctttttgaagttaatgttaaaact
ggagagattaaagtttcaggtaaactagattttgaaaaatccaagacgtatcaattaaat
gttaaggctagtgatcacggaggatattctgatacatgcaaagtaataattcaaataatt
gatgagaatgacaacgtcccgacaatacagatgatgtcattttcttactcgatatccgag
gattctcctccaggtacaactatagctgttattaacgtggatgacgaagactctgatggt
aacggtattgtcaagtgctccattaatgctgacatgcctttcaaaatcgagtcttcatta
acaggatattataccattgtaaccgataacttcttagacagagaaactattcctgagtat
aacatcaccattaccgtctctgaccaaggctccccgcctctgactagcaggaaacacatt
aatgtaaaagtgtctgacgtgaatgacaaccttcccacattttaccaatcagaatatatt
aagactgtaccagagaataactctcccgggttttcagtgttcactctcagtgctagtgat
gcagactggggacaaaacgctcggttttcttatttcttggaggaaaaaatgattaatgga
gcagctgtgtcttcgttagtgtctgtgaattcagaaagtggtgtcattcacgcagtgagg
tcatttgattacgagcaactcaagtggtttgaatttaacgtaactgctcgtgatgctgga
tcccctcctctgagttcagtggcaatagttagaatagtagtccaggaccagaacgacaac
ccccctcaggttctgtacccagtccagactggtggctctctggtggctgaaatggtgcct
cgttcagtcgatgtgggctatctggtcactaaagtggtggctgtggatgtggactctgga
cagaatgcctggctctcctataaactgcagaaagccacagacagggcgctgtttgaagtg
ggcttacagaatggagaaataagaactatccgccaagtcactgataaagatgctgtgaaa
caaagactgactgttatagtggaggacaacgggcagccctctcgttcagctacagtcatt
gttaacgtggcggtggcggacagcttccctgaagtgctgtctgagttcattgactttaca
caagacaaggagtacaacgacaacctgactttctacttagtgctggctttggctgtagtt
tccttcctcttcatcacatctctagtggttattatatcagtgaagatctacaggtggaga
cagtctcgcgtcatgtatcactccaatctccctgtgattccgtattatccaccacgttac
tcagacactttggggacagggactctccaacacgtgtacaactacgaggtgtgcaggacg
actgactccagaaggagtgactgtaagttcaacggagccggtagtcagaacgtgctgata
atggaccccagttctacagggacgatgcagcggatacagagtgagaagagcatcctggat
gaaccagactctcctcaagaggtgaggaagaatactcaacatgtttactccttgagatat
ttcttctctgagtttgactga

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