Cyclopterus lumpus (lumpfish): 117737758
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Entry
117737758 CDS
T09199
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03015
mRNA surveillance pathway
clum04261
Adrenergic signaling in cardiomyocytes
clum04382
Cornified envelope formation
clum04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117737758
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117737758
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117737758
09158 Development and regeneration
04382 Cornified envelope formation
117737758
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117737758
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117737758
03036 Chromosome and associated proteins [BR:
clum03036
]
117737758
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117737758
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117737758
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117737758
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Y_phosphatase2
DSE1_N
Motif
Other DBs
NCBI-GeneID:
117737758
NCBI-ProteinID:
XP_034399802
Ensembl:
ENSCLMG00005008069
LinkDB
All DBs
Position
10
Genome browser
AA seq
452 aa
AA seq
DB search
MLSPIQVLCSDITTLSLEPEPFASYTEADIISTVEFNHTGELLATGDKGGRVVIFQREPE
SKSEPFSQGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIK
LWKVSERDKRPEGYNLKDEEGHIKDMSTVTSLQVPVLMPMDLMVEVSPRRVFANAHTYHV
NSISVNSDYETYMSADDLRINLWHLDITDRSFNIVDIKPTNMEDLTEVITAAEFHPHHCN
LFVYSSSKGTLRLCDMREAALCDKHSKLFEEPEDPSARSFFSEIISSVSDVKFSHSGRYL
LTRDYLTAKVWDLNMESKPLETYQVHDYLRSKLCSLYENDCIFDKFECAWNGSDSVIMTG
AYNNFFRMFDRNTKRDVTLEASRESSKPRAVLKPRRVCAAGGKRRKDDISVDSLDFTKKI
LHTAWHPTENIIAIAATNNLYIFQDKLNSELH
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgttgagccccatccaggtcctgtgctccgacatcactaccctttctctggagcccgag
ccgtttgcctcttacactgaagctgatatcatctccactgttgagttcaaccacactgga
gagctcctggccacaggggacaaagggggccgagtggtcatctttcagagggaaccggag
agcaagtctgagcccttctcccagggagagtacaatgtctacagcaccttccagagccat
gagcccgagttcgactaccttaagagtctggagatcgaggagaagatcaataagatccga
tggctgcctcagcagaacgctgcacacttcctcctctccaccaatgataagaccattaag
ttgtggaaggtgagtgaaagagacaaacggcccgaggggtacaacctgaaggatgaggag
ggtcacatcaaggacatgtccaccgtcacctccctacaggtgccggtgctgatgccaatg
gacctgatggtggaggtgagcccgcgccgagtgtttgccaacgcccacacctaccacgtc
aactccatctccgtcaactccgactatgagacctacatgtcagctgatgacctgaggatc
aatctctggcatctggacatcaccgaccgcagcttcaacatcgtggacatcaaaccaacc
aacatggaggatctgacagaggtgatcacagcggctgagtttcaccctcaccactgtaac
ctgtttgtctacagcagcagcaaaggcacgctgcgcctctgtgacatgagggaagcagcg
ctgtgcgacaaacactccaaactgttcgaggagcccgaggacccgagcgcccgctccttc
ttctctgagatcatctcctccgtgtcggacgttaagttcagccacagcggtcgctacctg
ctcaccagagactacctgactgccaaagtctgggacctcaatatggagagcaagcccctg
gagacgtaccaggttcacgattacctccgcagcaagttgtgttccctttatgaaaacgac
tgcatctttgacaagtttgagtgcgcctggaacggctcggacagtgtgatcatgactgga
gcctacaacaacttcttccgcatgttcgaccgcaacaccaaacgggacgtgaccctggag
gcgtcgcgggagagcagcaaaccccgagctgtcctgaagccacggagggtgtgtgccgct
gggggaaagcgccggaaggacgacatcagcgtggacagcctggacttcaccaagaagatc
ctccacacggcctggcacccgactgagaacatcatcgccatcgccgccaccaacaacctg
tacatcttccaggacaaactcaactctgagctgcattaa
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