Cyclopterus lumpus (lumpfish): 117737758
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Entry
117737758 CDS
T09199
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03015
mRNA surveillance pathway
clum04261
Adrenergic signaling in cardiomyocytes
clum04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117737758
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117737758
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117737758
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117737758
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117737758
03036 Chromosome and associated proteins [BR:
clum03036
]
117737758
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117737758
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117737758
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117737758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Y_phosphatase2
Motif
Other DBs
NCBI-GeneID:
117737758
NCBI-ProteinID:
XP_034399802
Ensembl:
ENSCLMG00005008069
LinkDB
All DBs
Position
10:complement(13485386..13504784)
Genome browser
AA seq
452 aa
AA seq
DB search
MLSPIQVLCSDITTLSLEPEPFASYTEADIISTVEFNHTGELLATGDKGGRVVIFQREPE
SKSEPFSQGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIK
LWKVSERDKRPEGYNLKDEEGHIKDMSTVTSLQVPVLMPMDLMVEVSPRRVFANAHTYHV
NSISVNSDYETYMSADDLRINLWHLDITDRSFNIVDIKPTNMEDLTEVITAAEFHPHHCN
LFVYSSSKGTLRLCDMREAALCDKHSKLFEEPEDPSARSFFSEIISSVSDVKFSHSGRYL
LTRDYLTAKVWDLNMESKPLETYQVHDYLRSKLCSLYENDCIFDKFECAWNGSDSVIMTG
AYNNFFRMFDRNTKRDVTLEASRESSKPRAVLKPRRVCAAGGKRRKDDISVDSLDFTKKI
LHTAWHPTENIIAIAATNNLYIFQDKLNSELH
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgttgagccccatccaggtcctgtgctccgacatcactaccctttctctggagcccgag
ccgtttgcctcttacactgaagctgatatcatctccactgttgagttcaaccacactgga
gagctcctggccacaggggacaaagggggccgagtggtcatctttcagagggaaccggag
agcaagtctgagcccttctcccagggagagtacaatgtctacagcaccttccagagccat
gagcccgagttcgactaccttaagagtctggagatcgaggagaagatcaataagatccga
tggctgcctcagcagaacgctgcacacttcctcctctccaccaatgataagaccattaag
ttgtggaaggtgagtgaaagagacaaacggcccgaggggtacaacctgaaggatgaggag
ggtcacatcaaggacatgtccaccgtcacctccctacaggtgccggtgctgatgccaatg
gacctgatggtggaggtgagcccgcgccgagtgtttgccaacgcccacacctaccacgtc
aactccatctccgtcaactccgactatgagacctacatgtcagctgatgacctgaggatc
aatctctggcatctggacatcaccgaccgcagcttcaacatcgtggacatcaaaccaacc
aacatggaggatctgacagaggtgatcacagcggctgagtttcaccctcaccactgtaac
ctgtttgtctacagcagcagcaaaggcacgctgcgcctctgtgacatgagggaagcagcg
ctgtgcgacaaacactccaaactgttcgaggagcccgaggacccgagcgcccgctccttc
ttctctgagatcatctcctccgtgtcggacgttaagttcagccacagcggtcgctacctg
ctcaccagagactacctgactgccaaagtctgggacctcaatatggagagcaagcccctg
gagacgtaccaggttcacgattacctccgcagcaagttgtgttccctttatgaaaacgac
tgcatctttgacaagtttgagtgcgcctggaacggctcggacagtgtgatcatgactgga
gcctacaacaacttcttccgcatgttcgaccgcaacaccaaacgggacgtgaccctggag
gcgtcgcgggagagcagcaaaccccgagctgtcctgaagccacggagggtgtgtgccgct
gggggaaagcgccggaaggacgacatcagcgtggacagcctggacttcaccaagaagatc
ctccacacggcctggcacccgactgagaacatcatcgccatcgccgccaccaacaacctg
tacatcttccaggacaaactcaactctgagctgcattaa
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