Cyclopterus lumpus (lumpfish): 117737807
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Entry
117737807 CDS
T09199
Symbol
lrit3a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117737807 (lrit3a)
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117737807 (lrit3a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
LRR_4
I-set
LRR_1
Ig_2
LRR_14
ig
fn3
LRR_5
FAM163
C2-set_3
LRR_9
Motif
Other DBs
NCBI-GeneID:
117737807
NCBI-ProteinID:
XP_034399884
Ensembl:
ENSCLMG00005007973
LinkDB
All DBs
Position
10:complement(20425084..20430717)
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AA seq
623 aa
AA seq
DB search
MAHPFCPSQCTCVFHGHTDGTGSRSVLCNDQDMLDIPVNVPVDTVKLRIEKTMVRRIPTE
AFYYLVELRFLWITYNAVSSVDTASFYNLKVLHELRLDGNMISVFPWESLKEMPRLRTLD
LHNNRITNVPNEAVPHLLNITYLDLSSNKLVTLPSDLMDIWPPFNGAPISTNASQKVVLG
LQDNPWYCDCKISKLIELSKMTGTPVVLMDLLMTCSGPENMAGVPFQRAELDNCIKPSVM
TSATKITSPLGSNVLLRCDATGLPTPTLYWAKSDGSQFNNTVQESPGEGIRWSIMSLHGI
LHKDAGNYSCRAKNVAGNADATISVSVAGGISTTIPPLRPSIETEQTSLGTTFTPPMDTT
NSPSTTATVPPRASTAVAPKKPKTTTSTSVQKDSLKQAKNQQEGNGRKLAADEKSKKSDA
SKSVKDLKIVEETADSAVLLWTADGLPNDAPLTVVYSPYDEDDIKRTLETDAGSGKVLLE
GLSSGTRHSVCLVAKGSAAGKDPCIDFYTLDNVKDGGQSALFIIISGIACALVVSLIALL
IYKILALYCSGQNTASDEEELEKDSYVNFETISMKQRTLNSHPTELWARRATHESERMLL
CSRSSIDSQMTYKSDSSRCEYLC
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggctcatcccttctgtccatcccagtgcacctgtgtcttccatggacataccgacgga
acgggatccagatcagtgctctgcaatgaccaagacatgttggacatccccgtcaacgtc
cctgtggatacggtcaaacttcgtattgagaaaactatggtgcgacgaatccctacggaa
gctttttactacctggtggagctgcggttcctgtggattacttacaatgccgtcagctca
gtggatactgcaagtttctacaacctcaaagtgctccacgagctgcggctggacgggaat
atgatctccgttttcccttgggagtctctaaaagagatgcccaggctgaggacactggat
ctacacaacaacaggatcactaatgttccgaatgaggcggtaccccacctcctcaacatc
acctacttggatctatccagcaacaagttggtcaccctgccctctgacctcatggatatc
tggccccccttcaatggagcacctatctccactaatgcctcccagaaagttgtgttaggc
ctccaagataacccctggtactgtgactgcaaaatctccaagctgatcgagctttccaaa
atgactggcacaccagtggttttgatggacctattgatgacctgcagcggaccagagaat
atggctggtgtcccttttcagcgggctgagcttgacaattgcataaagccgtcggtcatg
acttcggcaaccaagatcacatctcctttgggcagtaatgtcctcctgcgctgtgacgcc
acagggcttccaacaccaacgctttattgggcgaagtcagatggctcgcaattcaacaac
acagtccaggagtcacctggagagggcatcagatggtccatcatgagcttgcatggaata
ttacacaaagacgccggaaactacagttgcagagctaagaatgttgccggcaacgcagac
gccaccatatctgtctcggttgctggtggcatcagtaccaccatccccccactgaggcct
agcattgaaaccgaacagacgagtctaggcacaacatttactcccccaatggacactacc
aactcgcccagcaccaccgccacagttcccccaagagcgtcgacagcggttgcccctaag
aagccgaaaactaccaccagcaccagtgtacagaaagactcgctcaaacaagcaaaaaac
cagcaagaaggcaatgggagaaagctcgcggcagatgaaaagagcaaaaaaagtgatgca
tcaaagtccgtcaaagaccttaagattgtagaggaaactgctgacagtgcagtgttgctc
tggacagcggatgggttaccaaatgacgccccactaacggtggtatactcaccctatgat
gaggatgacatcaaaaggacattggagactgacgctggcagcgggaaagtgctcctcgag
ggactgtcatctgggacgaggcactcggtttgcctcgtagcaaaagggagtgctgctgga
aaagatccttgcattgatttctacacattggacaacgtaaaggacggtgggcagagcgcg
cttttcattatcatcagcggcatcgcttgtgctttggttgtgtctcttattgcactgctg
atctacaagattctcgctctgtactgcagtggacagaacacagcttcggacgaagaggag
ctggaaaaagacagctacgtcaattttgagaccatttcaatgaagcaaaggaccttgaac
tctcacccaactgagctttgggcaaggagagcgactcatgaatcagagcgaatgctcctg
tgctccaggtcaagtattgactctcagatgacttataaaagtgacagttcccgctgtgag
tatctctgctga
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