Cyclopterus lumpus (lumpfish): 117737827
Help
Entry
117737827 CDS
T09199
Symbol
lsm11
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117737827 (lsm11)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
117737827 (lsm11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Lycopene_cycl
Motif
Other DBs
NCBI-GeneID:
117737827
NCBI-ProteinID:
XP_034399915
Ensembl:
ENSCLMG00005021706
LinkDB
All DBs
Position
10:complement(8591497..8593634)
Genome browser
AA seq
343 aa
AA seq
DB search
MEERERRSVKSDTKDTAAPSCSRAPSAPEHQAAAGSRSGDDDAERVDVCSDHFDPLLALY
SPTVPLPFPNIKGFNNVAAYESFMKGGRGRAKPENVEKRRLKAMKGVADPERIERLKKLI
VNNPVSEKAQSSGTARRRRQELQKNVLTRMPLCKGSPLGELYRCVEERIRVKVHIRTFKG
LRGVCSGFVVAFDKFWNMAMVDVDETYREPLLGEAFYHEKALTISRLFEKLKLQENPGGD
EPAKKHEAQETASKHQPANPGSTPKNQSAHPTSKRGDSGAESKLSDAVGVKWDKHKVSGP
EGRRKKDSQTYGKVHTRHINQLFIRGENVLLVNPQPLCLLPAV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagagagaggaggagtgtgaagtccgacactaaagacacggccgctccaagc
tgttcaagagcgccatcagccccggagcaccaagcagcggcgggcagtcggtccggagac
gatgacgcagaaagagtagacgtctgctccgatcactttgacccgctcctggccttgtac
tcgccgactgtaccgctgcctttcccaaatatcaagggcttcaacaatgtggcggcgtac
gagagcttcatgaagggcggccggggcagagccaagccggagaatgtggagaagagacgg
ctcaaggcgatgaaaggggtggcggaccctgaacgcatcgagaggctgaagaagctcatc
gtgaacaacccggtgtcggagaaggcgcagagcagcggcacggcgcggaggaggaggcag
gagctccagaaaaacgtcctgaccaggatgcccttgtgtaaaggcagtccattgggggag
ctgtacagatgtgtcgaggagaggataagggtcaaagttcacatcaggaccttcaagggg
ctgaggggagtgtgctccggctttgtcgtggccttcgacaagttctggaacatggcaatg
gtcgatgtagatgagacgtaccgagagcctctgcttggagaggccttctaccatgaaaag
gccctcaccatctcccggctcttcgagaagctaaagctccaggagaacccgggaggtgat
gagccagcaaaaaagcacgaagcccaggaaacagccagcaagcatcagcctgcaaaccca
ggaagtaccccgaaaaaccagtctgctcacccgactagcaagagaggggacagcggggcg
gagtccaaactgtccgacgctgttggagtcaaatgggataaacacaaagtctcgggccca
gagggccgtcggaagaaagactcccagacgtacggcaaggtccacacacgccacatcaac
cagctgttcatccggggggagaacgttctcctggtgaacccacagccgctctgcttattg
cctgcagtctga
DBGET
integrated database retrieval system
