Cyclopterus lumpus (lumpfish): 117737853 Help Entry 117737853         CDS       T09199                                  Name (RefSeq) protocadherin-1-like isoform X1   KO K16498   protocadherin delta 1 Organism clum  Cyclopterus lumpus (lumpfish) Pathway clum03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:clum00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     117737853  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:clum01009]     117737853   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:clum04515]     117737853 Protein phosphatases and associated proteins [BR:clum01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      117737853 Cell adhesion molecules [BR:clum04515]  Cadherins   Protocadherins    117737853 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_CELSR2_9th Cadherin_2 Fibulin_C PDGLE Motif Other DBs NCBI-GeneID:  117737853 NCBI-ProteinID:  XP_034399955 Ensembl:  ENSCLMG00005016968 LinkDB All DBs Position 10:24598449..24653006 Genome browser AA seq 1018 aa AA seqDB search MAAARRWFLLCLAVVLQVSCGAAPSDILYRVPEEQPPNTLIGSLAADRGLPDTGHLYKLE VGTPYLRVDGKTGDIYTTEIPIDRETLRDCRNLFEGSKCFLEFEVSITDMVKGIGSGPRL IEGRIEVLDINDNTPQFSSPILTLSIPENTHVGALFSIPMATDRDSGANAVAEYSLSTGP DADRLFGLQVSVDSDEKLPQLVVMGNLDRERKDSYDLNIRVVDGGKLPRASSALLRVTVT DQNDNAPTFERSHYEAELPENSPQGHSVLQVRANDADIGTNGEIDYSLHQASEAVQRLLR IDRSTGIIYVKGLVDREEESFLKFFVVAKDRGPISKSSKVLVTINVRDQNDNAPAIEIRG IGLVTHQDGVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESAND RKRKYFLQTTTPLDYERVRDYRIEIVAVDSGNPALSSSNSLKVQVMDMNDNTPIFSPALL EVDFAEGNQPGDKVLDVAATDADSGTNAELAYSIIDLAATRLFDIEADTGEIRVKNLLDR EETERYEFRVAAADKGVPSKTGTSTVVVNVLDRNDNDPKFMLSIYSFSVIENMTPLNPVG VVTVTDADKGENARVRLFVEPDNGKFVIQNGTGTILSSISFDREKESTYTFRLKAVDAGD PPRSSYVGVTINVLDENDNAPYVTKPANSSYTYMSPVTPPDTSVEVVEAEDIDSGPNAEL VYTIMGGNPYGLFHISPNSGEITLVQEFTGKHNGLHRLVVRVSDKGKPPRHTTALVHVFV NDTKSNVSLIEALVGHSLYTPLDRDIAGDPNYALAQRSNILYGSLAGIAGVILVIVAVVV IRHRLQKDTKSGYQAGKKESKDLYAPKQGPKNGKGKKSKKGKAPKPAKPLEEDVEAGLQK GLQFNHINEDVTDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQAVQ DLPATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSSKQVGDYANTPYNTDIYWTKQVW NT seq 3057 nt NT seq  +upstreamnt  +downstreamnt atggcggcggcgaggcgctggttcctgctgtgcctggcggtcgtcctgcaggtctcgtgc ggcgcggcgccctccgacatcctgtaccgggtccccgaggagcagccgcccaacacgctg atcgggagcctggcggcggaccggggcctgcccgacacggggcacctctacaagctggag gtgggcacgccgtacctgcgcgtggacggcaagacgggcgacatctacaccacggagatc cccatcgaccgcgagacgctgagggactgccgcaacctgttcgagggcagcaagtgcttc ctggagttcgaggtgtccatcaccgacatggtgaagggcatcggctcggggccgcggctg atcgagggccgcatcgaggtgctggacatcaacgacaacacgccgcagttctcctcgccc atcctcacgctgtccatccccgagaacacgcacgtgggcgccctcttctccatccccatg gcgaccgacagggactccggcgccaacgccgtggccgagtactcgctgagcacggggccg gacgccgaccggctcttcggcctgcaggtctccgtggactcggacgagaagctgccccag ctggtcgtcatgggcaacctggaccgcgagaggaaggactcgtacgacctgaacatccgg gtggtggacggagggaagctgccgcgggcgagcagcgccctgctgagggtcaccgtcacc gaccagaacgacaacgcacccacgtttgagaggagccactacgaggcggagctgcccgag aacagtccacaggggcactcggtgctgcaggtccgagccaacgacgcggacatcggcacc aacggggagatcgactacagcctccaccaggcgtcggaggccgtccagaggctcctgcgc atcgaccgctccacgggcatcatctacgtcaagggcctggtggaccgcgaggaggagagc ttcctcaagttcttcgtggtcgccaaagaccgcgggcccatctccaagagctccaaggtc ctggtgaccatcaatgtcagggaccagaacgacaacgcgccggccatcgagatccgcggc attggcctggtgacgcaccaggacggcgtggccaacatctccgaggacatgcctatcggc acgcccgtggcgctggtccaggtgtcggaccgcgacgagggagagaacgcggtggtgacg tgcgtggtcgccggcgacgtcccgttccagctccggcccgccagtgagtcggccaacgat cggaagaggaagtacttcctgcagacgacgacgccgctggattacgagcgcgtcagggat tacaggattgaaatagtcgcggtggattctgggaacccggcgctgtccagctccaactcc ctcaaagtgcaggtcatggacatgaacgacaacacgcccatcttttcccccgcgctgctc gaggtggacttcgccgagggcaaccagccgggcgacaaggtgctggacgtcgcggcgacg gacgcggacagcggcaccaacgcagagctggcgtacagcatcatcgacctcgcggccacc aggctctttgacatcgaggctgacacgggagagatccgcgtgaagaacctgctggatcgg gaggagacggagcgctacgagttccgcgtggccgcggcggacaaaggcgtccccagcaaa accggcacctccaccgtcgtggtcaacgttctggaccgcaacgacaacgaccccaagttc atgctgagcatctacagcttctccgtcatcgagaacatgactccgctcaaccccgtcggc gttgtgacggtcaccgacgccgacaagggcgagaacgcccgcgtgaggctgtttgtggaa ccggacaacgggaagttcgtgatccagaacggcacggggacgatcctgtccagcatctcc ttcgaccgcgagaaagagagcacctacaccttccgcctgaaggccgtggacgccggtgac ccgcctagatcctcctacgtgggcgtgaccatcaacgtcctggacgagaacgacaacgcc ccctacgtcaccaaaccggcaaactcctcctacacctacatgtcccccgtcaccccgccg gacaccagcgtggaggtggttgaggccgaggacatcgactccggacccaacgccgagctg gtctacaccatcatgggggggaacccgtacggcctgttccacatctcgccgaacagcggc gagatcacgctggtgcaggagttcaccggcaagcacaacgggctgcaccgcctggtggtg agggtcagcgataaaggcaagcccccccgccacaccaccgccctggtccacgtgttcgtc aacgacaccaagtccaacgtgtccctcatcgaggcgctggtcgggcacagcctctacacc cctctggaccgggacatcgccggagaccccaactacgccctcgctcagcgcagcaacatc ctgtacggcagcctggcggggatcgccggcgtgatcctcgtcatcgtggccgtggttgtc atcagacaccggctgcagaaggacaccaagagcggctaccaggccggcaagaaggagagc aaggacctgtacgcgcccaagcagggccccaaaaacggcaaggggaagaagagcaagaag gggaaggcccccaaaccggcgaagccgctggaggaggacgtggaggccggcctgcagaag ggcctccagttcaaccacatcaacgaggacgtcaccgacagccccaggatccacctgccc ctcaactacccgccggggagccccgacctggggcgccactaccgctccaactcccccttg ccgtccatccagctgcagccgcagtcgccctccgcctccaagaagcaccaggccgtccag gacctccccgccaccaacaccttcgtggggacgggcgacaacaactccacgggctccgac caatactcggattacagctacaaggccaacccgcccaaatacagcagcaaacaggtagga gactacgcaaacacgccgtacaacacggacatctattggaccaagcaggtgtggtag

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