KEGG   Cyclopterus lumpus (lumpfish): 117737882
Entry
117737882         CDS       T09199                                 
Symbol
cetn2
Name
(RefSeq) caltractin
  KO
K10840  centrin-2
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    117737882 (cetn2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clum03019]
    117737882 (cetn2)
   03036 Chromosome and associated proteins [BR:clum03036]
    117737882 (cetn2)
   03400 DNA repair and recombination proteins [BR:clum03400]
    117737882 (cetn2)
Messenger RNA biogenesis [BR:clum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     117737882 (cetn2)
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    117737882 (cetn2)
   Centrosome duplication proteins
    Centriole replication proteins
     117737882 (cetn2)
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      117737882 (cetn2)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 EF-hand_5 AIF-1 EF_EFCAB10_C EH Dockerin_1 SUB1_ProdP9 DUF7645 EF-hand_14 SurA_N_3 HerA_C RPN1_RPN2_N SRI DUF5580_M LETM1_RBD MgtE_N MJ1010-like_2nd
Other DBs
NCBI-GeneID: 117737882
NCBI-ProteinID: XP_034400014
LinkDB
Position
10:10311152..10312870
AA seq 203 aa
MIGRLHRPKENILQNRSAAPVCQLTKQHLMATSAKRPSLQGPVPPPRKKTTPKPELTEEQ
KQEIREAFELFDTDGSGYIDVKELKVAMRALGFEPKKEEIKKMIGDVDKDGTGKISFADF
LSVMTQKMAEKDSKEEILKAFRLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEA
DRDGDGEVNQQEFLRIMKKTCLY
NT seq 612 nt   +upstreamnt  +downstreamnt
atgataggaaggcttcatagacccaaagaaaatatattgcaaaatagatctgcagctcct
gtttgtcagttaactaaacagcacctgatggcaaccagtgccaagagaccgtccctgcag
ggtcctgtgccacctcctcgcaagaagacaacccccaaaccagagctgaccgaggagcag
aagcaggagatccgggaggcctttgagctgtttgacaccgatggatccggatacatcgat
gtcaaggagctcaaggttgcaatgagagctctggggtttgaaccaaagaaagaggagatc
aagaagatgattggcgacgtggataaggacggcacagggaaaatctctttcgctgacttt
ctctctgtcatgactcagaaaatggccgagaaggactccaaagaggagatcctgaaagct
ttccgcctgtttgatgacgacgaaacgggcaagatctcattcaagaatctgaagagagtc
gccaaagagctgggagagaacctcacagatgaagagctgcaggagatgatagatgaagcg
gacagggatggagatggagaagtgaaccagcaggagttcctgcgcattatgaagaaaacc
tgcctgtactga

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