Cyclopterus lumpus (lumpfish): 117737907
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Entry
117737907 CDS
T09199
Symbol
sox3
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117737907 (sox3)
Transcription factors [BR:
clum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117737907 (sox3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117737907
NCBI-ProteinID:
XP_034400043
Ensembl:
ENSCLMG00005020478
UniProt:
A0A8C3AMN6
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All DBs
Position
10:15954757..15956659
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AA seq
300 aa
AA seq
DB search
MYNMMETELKTPLPQSNSGSAPGAKNNSANDQERVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGANAVNNSVSVGQRMDGYAHMNGWTNSAYSLMQDQLAYPQHHSMNSPQIQQM
HRYEMAGLQYPMMSSAQSYMNAASTYSMSPAYTQQTSSAMGLSSMASVCKTEPSSPPPAI
TSHSQRACLGDLRDMISMYLPPGGESAEHSSLQSSRLHSVHPHYQTAGTGVNGTLPLTHI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagctcaagaccccgctcccgcagtccaactcgggctcg
gcgccgggcgccaagaacaacagtgccaacgaccaggagcgtgtgaagcggccgatgaac
gccttcatggtctggtcccggggacagcggaggaagatggctcaagaaaatcccaaaatg
cacaactctgaaatcagcaagaggcttggtgctgactggaaactcctgaccgacgctgaa
aagaggccattcatcgacgaggccaagcgtctgcgcgctatgcacatgaaggagcatccg
gattataaataccgtccccgcaggaagaccaagaccctgctcaagaaagacaagtattct
ttgcccgggggactgttggcgccaggagccaacgccgtcaacaactctgtgtcggtgggg
cagcggatggacggttacgcgcacatgaacgggtggacgaacagtgcgtactccctcatg
caggaccagctggcctaccctcagcatcacagcatgaacagcccccagattcagcagatg
caccggtacgagatggcagggctccagtacccgatgatgtcctcggcgcagagctacatg
aacgcggcttccacgtacagcatgtccccggcgtacacgcagcagaccagcagcgccatg
ggactcagctccatggcgtccgtgtgcaagaccgagccgagctcaccgccgccggccatc
acgtcccactctcagcgggcgtgtttgggggacctgagggatatgataagcatgtacctg
cctcccggcggagaaagcgcagagcattcctccctgcagagcagccggttacacagcgtc
catccgcactatcagaccgcagggactggcgtcaatgggacgctacctctcacccacatc
tga
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