Cyclopterus lumpus (lumpfish): 117737909
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Entry
117737909 CDS
T09199
Symbol
aff2
Name
(RefSeq) LOW QUALITY PROTEIN: AF4/FMR2 family member 2
KO
K15194
AF4/FMR2 family member 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117737909 (aff2)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117737909 (aff2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
117737909
NCBI-ProteinID:
XP_034400045
LinkDB
All DBs
Position
10:5816808..5914732
Genome browser
AA seq
1614 aa
AA seq
DB search
MSGSRYHNVLVQIPQHNVWVQVPQRLGPGTTMSGSRYHNVLVQIPQHNVWVQVPQRLGPG
TTMSGSRYHNVWVQIPQHNVWVQSSGVGSQRPEEEGVGEEEQEVQQDEDLFSTGFNLFGE
PYKTNKGDALASRVQNTLGSYEEMKDLLTSHSNQSHLVGIPKGSNNLQTPTTSTTERPAL
ETQLFNEALRGGTGGGGGGGAAEGGGDKRMGNASSSSSTAMQPPAAAASSASATATPHPS
SKMSRSSMDWSRAGHGQSTQGGGLVLGLAPVTAATGGRGKLSLMEEQQMQRHDELFSSLK
DELGLKGDSSPSSSSSSSSSSSSSRRRHASHPSKTLPLPDGGNFRSSTVDGGHFKSSTNA
ENGGHFKSSPFENETSSHLSTSSSPLASTSVLTTPTPGLTTPTSGLTTPTFPPGSLSGKP
MAIQQKPTAYVRPMDGQDQVPSDSPQMKPPLVPTEGFNNSQAYGGNAGNAKNKLPKLSLG
HTGEVSLPNDSSCVEEILREMTHSWPPPLTAIHTPGKADQTKFPIPNKESQHVTSGYNTQ
KRCTLSANKPAAKPQTAPQKSMLEDDLKISSDEEEAEQQVSDKPKARGPALSGASGSSSE
SESSSESDTDESESSSSDSEYNQTSRTHTPEPEPPSANKWQLDSWLNKVQAQTKPLVPPQ
PEHGTGSITQGTGTFSPRSEAPGVGTAAKTKPCVPNSTPGPAAQTLEHKETRGAFCPGRE
KAKAKLSQKASGEGQRSKVRMSPGLLSGPEVTTQRRNTTGKKQPRRTERSNSAEDAQSQT
WSRTNQQSPVAREKDLLPPPSLELQTPPRPRSKPPSGKTAPRKEPRSATNSNNSSVTPPA
ALQQTPAPIPAVSVNQDKRKHRGPSSKITPKSREFIETDSSSSSSECHSDSEGALKILAL
PPQEKHSAINTQTLSHTNAPPLPPCPGSAGGLGTTFGGKGLRVKDGGSVTTNGSSSINGS
ISGGTNALSIGNVTGSFGTSVPDPGGLGGQRKDPVSMSPPPNVRHEVAPSPLREFQEIQS
LWVKVELSLLGRVPGQGLGERSRTGQAERDGSEGRDRERTGVAERERQKQAEREWPALRE
RQRPPKGEKPEEENERLAQDRERQGDRDRLTERERPTDSQDRDRSGLGERERTAGKDREK
TCQGPGVPDNPPAQEQSNPRLAGRTESKHRRQAAGNVAVPAEKHANKSKRKHKSDHSESS
ASGNKKLRLDKDCQLLPPCISPIHNHKNSSADSSLNRKQSRRREDKLLPPLLSPLSDDPP
PKRTCDSGSSLGQEGVASGTQPCSISTSSSTSTSTSSSSSSHRHRRGEGKASAPARNGSE
VDPHRGKPGGDGYHANGQSDSEVWSEPLTEPAEPRRPRLAFSDTVHSADYYMQEAKRLKH
KADALTDKFGKAVNYADGALSFIECGNAMERDPLEAKSPYTMYSETVELIRYAMRLKNFT
SQSATVAEKKLAVLCNRCLSLLYLRMFHLKKDHAVKYSRSLMEYFKNSAKSSHQAPSPWR
INGKVNGTPSPLSLSPSPAGSGGAGGGGAPGSSGSVAIPQRIHHMAASHVNITNNILRSY
EHWETADRLAADSQEFFQELDSVMEPLSQQSSMTELVRYIRQGLHWLRSEAHLL
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggtccaggtaccacaacgtcttggtccagataccacaacacaacgtctgggtc
caggtaccacaacgtctgggtccaggtaccacaatgtctgggtccaggtaccacaacgtc
ttggtccagataccacaacacaacgtctgggtccaggtaccacaacgtctgggtccaggt
accacaatgtctgggtccaggtaccacaacgtctgggtccagataccacaacacaacgtc
tgggtccagtcatctggagtcggatcgcagcgccctgaagaggagggagtgggagaggag
gaacaggaggtgcaacaggatgaagacctgttctcgaccggattcaacctgtttggggaa
ccatacaagactaataaaggtgatgcgttggccagtcgcgtccagaacacgcttggttcc
tacgaggaaatgaaagacctgttaaccagccactccaaccagagccacttggtgggaatc
cccaaaggcagcaacaacctgcagaccccgaccacgtcgacgacggagaggcccgccttg
gagacccagcttttcaacgaagccctgagaggagggacaggtggtggaggaggaggagga
gcagcagagggaggcggggacaagaggatgggaaacgcgtcttcctcctcttcgactgcc
atgcagccgcccgccgcggctgcgtcgtcagccagcgccacggcgaccccgcatccgagt
tccaaaatgtcccgaagctccatggactggtcgagggccggccacggacagagcacccag
gggggcggcctcgttctggggttggcgccggtcacggccgccacgggtgggagagggaaa
ctgtctctaatggaggaacagcaaatgcagcggcacgacgagctgttcagctcgctcaaa
gacgagctcggcctcaaaggcgactcgagcccttcgtcctcctcttcgtcctcctcttcc
tcgtcctcttctcggagaaggcacgcatcacacccctccaaaacccttcctcttccagat
ggcggcaatttccgatcttccaccgtggacggcggccatttcaagtcttccactaacgcg
gaaaatggtggacattttaaatcctccccgtttgaaaacgagaccagctcccacctctct
acatcctcctccccgctggcttccacgtccgttctgacaacgcccacccctggtctaacc
actcccacgtccgggctgaccacgcccaccttcccgcccggtagcctatcggggaagccg
atggcaatccagcagaagcccaccgcatacgttcgcccgatggacggccaggaccaggtg
ccgagtgactcgccccagatgaaaccccctctggtgcccacggaggggttcaacaacagt
caggcttacggaggaaacgccgggaacgccaagaacaagctgccgaaactgagcctcggc
cacacgggggaggtcagcctaccaaatgactccagctgtgttgaagagattttgcgggag
atgacccattcctggccgcctcccctcacagccatacacacgcccgggaaggccgatcag
accaagttccccatcccaaacaaggagtcacagcatgtgacctcaggctacaacacccag
aagcgatgtaccttatcagctaacaagcctgctgcgaaaccacagactgcaccacagaag
tcgatgttggaggatgacctgaagatcagcagcgacgaggaggaggccgaacagcaggtg
tctgacaagcccaaagccagaggccccgccctaagtggagcatcagggagcagcagtgaa
tcagagagcagctcggagtcggacacggacgaatcagagagcagctccagtgacagcgag
tataaccagacctcccgcacacacactccagagcctgagcccccctcggccaacaagtgg
cagctggacagctggttgaataaggtccaagctcaaaccaaacccctggttccccctcag
ccagaacatggcacaggctccatcacccagggtacggggactttctctccgaggagtgaa
gcaccaggagtgggaacggccgccaagaccaagccttgcgtacccaacagcacccctggt
cctgctgcccaaacgttggagcacaaggaaacaaggggagctttctgcccgggcagagag
aaggccaaggccaagctcagccagaaggcctcgggggagggccagaggtcaaaggtgagg
atgtcgccgggcctgttgtcagggccggaggtcacgacccagaggaggaacaccacaggg
aagaaacagcccagacgaacggagaggtcaaacagtgcggaggatgctcagagccagacg
tggagcagaaccaaccagcagagccctgtggctagggagaaggacttgttgcctcccccc
tccctggagcttcagacccccccgaggccacgaagcaaaccccccagtgggaaaacagcc
cccaggaaagaacctcgcagtgctaccaactcaaacaacagctcagtaactccaccagcg
gcgctacagcaaacccccgcgccaatacctgctgtcagtgtaaaccaggacaagaggaaa
cacagaggtccgagcagcaaaatcacgcccaagtcccgcgaattcatcgagacggactcc
tcatcctcgtcctccgaatgccactcggattcggagggagccctcaaaattcttgcgctg
ccgccgcaggagaagcactcggccatcaacacgcagactctgtcccacaccaacgcgcct
cctctccccccgtgccccgggtcagcggggggcctgggaacgacgttcggcgggaagggg
ctccgagtcaaagacggcggcagcgtgaccaccaacggtagcagcagcatcaacggtagc
atcagcgggggtaccaacgccctgagcatcggcaacgtaactggttcctttggcacttct
gttcccgaccccggagggttagggggtcagcgcaaagacccggtgtccatgtcgccgcct
cccaacgtcagacacgaggtggctccgtcccccttgagggaattccaggagatccagagt
ttatgggtgaaagttgagctaagtttactcggcagggtgccgggccagggtttgggggaa
agatccaggacgggacaggccgaaagggacgggagcgaagggagggacagggagaggaca
ggggtggccgagagggagagacagaagcaggccgagagagagtggccggcgctgcgggag
aggcagaggccacccaaaggggagaaaccggaggaagaaaacgagcggctggcgcaggac
agagagcggcagggcgacagggaccgattaacggagagagagaggccgacggacagccag
gaccgagacaggtcggggctcggggagagggagcggacggcggggaaggacagggagaag
acgtgccaaggtccgggggtcccggacaacccccctgcgcaagagcagagtaatcccagg
ctggcagggcggacggagagcaaacacaggaggcaggccgctggaaacgtggcggtccca
gcggagaaacacgccaacaagagcaagaggaaacacaagtcggaccacagtgagtcgtcg
gccagcggcaataagaagctgcgattggacaaagactgtcagctgctcccgccctgcatc
tctccgatacacaaccacaagaacagctctgcagatagttcactaaacaggaaacagtct
cgacggcgtgaagacaagctgcttccccccctcctctctccgctctctgacgatccgcct
cccaaacgaacctgtgacagcggttcctctctcggccaggagggcgtcgcctccgggacg
cagccctgctccatctcgacctcctcctccacctccacctccacttcctcttcctcttca
tcgcacagacacaggagaggggaaggcaaggcgtcggcacctgcgaggaacggcagtgaa
gtcgacccccaccgcgggaagcccggcggagacggttaccatgccaacgggcagtcggac
tctgaggtgtggtcggaaccgctgacggaacccgcagaacctcgcaggccgcggctggcc
ttcagcgacacagtccacagtgcagactactacatgcaggaggccaagagactgaagcac
aaggccgacgctctgacggacaagtttggtaaagcggtgaactacgcagacggcgccctc
tccttcatagagtgtgggaatgctatggagcgagatcctctggaggccaagtccccgtac
accatgtactctgagactgtggagctgatcaggtacgccatgaggttgaagaacttcacc
agccaatcggccaccgtcgccgagaagaaactcgccgtgctgtgtaaccgctgtctatct
ctgctgtatctgaggatgttccatttgaagaaagatcacgctgtcaagtactcgcggtcg
ctcatggagtacttcaagaattcagccaagagttcccaccaagcaccctctccctggagg
atcaatgggaaggttaacgggaccccgtccccactctcgctcagcccctccccagccggc
agtggaggggctgggggtggaggtgccccgggctcgtcaggaagtgtggccattcctcag
cgcatccaccacatggccgccagtcacgtgaacatcaccaacaacatcctgcggagctac
gaacactgggagacggccgacaggctggccgccgatagccaagagttcttccaggagctg
gattcggtgatggagccgttgagtcagcagagcagcatgacggagctggtccgatacatc
aggcagggactgcactggctccgctcagaggctcacctgctgtga
DBGET
integrated database retrieval system
